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13_1_40cm_scaffold_590

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_590_1
Desulfuromonas acetoxidans, Desulfuromonas, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1..120)
DNA (120bp) protein (40aa)
elongation factor Tu (EC:3.6.5.3)
Elongation factor Tu n=3 Tax=Acholeplasma laidlawii RepID=EFTU_ACHLI
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=281689 species="Bacteria; Proteobacteria; Deltaproteobacter
13_1_40cm_scaffold_590_trna_4
unknown

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comp(285..357)
DNA (73bp)
transferRNA
13_1_40cm_scaffold_590_2
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

comp(518..1357)
DNA (840bp) protein (280aa)
dppA; D-alanyl-aminopeptidase (EC:3.4.11.-)
Peptidase M55 n=1 Tax=Geobacillus sp. MAS1 RepID=V6VE94_9BACI
peptidase M55 D-aminopeptidase; K02035 peptide/nickel transport system substrate-binding protein Tax=RBG_16_Armatimonadetes_67_12_curated
13_1_40cm_scaffold_590_3
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

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1857..2915
DNA (1059bp) protein (353aa)
metalloendopeptidase-like membrane protein id=24513784 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
metalloendopeptidase-like membrane protein Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
peptidase M23
13_1_40cm_scaffold_590_4
unknown

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3055..3393
DNA (339bp) protein (113aa)

This feature has no annotations

13_1_40cm_scaffold_590_5
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

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3433..4353
DNA (921bp) protein (307aa)
phosphoesterase id=1244752 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
phosphoesterase Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
phosphoesterase
13_1_40cm_scaffold_590_trna_1
unknown

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4649..4720
DNA (72bp)
transferRNA
13_1_40cm_scaffold_590_trna_2
unknown

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4740..4811
DNA (72bp)
transferRNA
13_1_40cm_scaffold_590_6
GWA2_OP11_41_24, Curtissbacteria, Microgenomates, Bacteria

Not on your lists

5185..5604
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CEJ2_9BACT
H-N-H endonuclease F-TflIV {ECO:0000313|EMBL:KKS05074.1}; TaxID=1618411 species="Bacteria; Microgenomates.;" source="Microgenomates (Curtissbacteria) bacterium GW2011_GWA2_41_24.;"
hypothetical protein
13_1_40cm_scaffold_590_trna_3
unknown

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5592..5677
DNA (86bp)
transferRNA
13_1_40cm_scaffold_590_7
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(6028..7110)
DNA (1083bp) protein (361aa)
transport system permease; K02015 iron complex transport system permease protein id=24519381 bin=RBG_19FT_COMBO_GAL15_69_19 tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
transport system permease; K02015 iron complex transport system permease protein Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
transport system permease
13_1_40cm_scaffold_590_8
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(7107..7679)
DNA (573bp) protein (191aa)
GTP cyclohydrolase (EC:3.5.4.16); K01495 GTP cyclohydrolase I [EC:3.5.4.16] id=24519382 bin=RBG_19FT_COMBO_GAL15_69_19 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
GTP cyclohydrolase (EC:3.5.4.16); K01495 GTP cyclohydrolase I [EC:3.5.4.16] Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
GTP cyclohydrolase (EC:3.5.4.16)
13_1_40cm_scaffold_590_9
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7648..8883)
DNA (1236bp) protein (412aa)
Dihydropteroate synthase {ECO:0000256|RuleBase:RU361205}; Short=DHPS {ECO:0000256|RuleBase:RU361205};; EC=2.5.1.15 {ECO:0000256|RuleBase:RU361205};; Dihydropteroate pyrophosphorylase {ECO:0000256|Rule
Dihydropteroate synthase n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QRZ7_ACEAZ
DHPS: dihydropteroate synthase
13_1_40cm_scaffold_590_10
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(8929..10209)
DNA (1281bp) protein (427aa)
Arabinose efflux permease family protein n=1 Tax=Paenibacillus mucilaginosus 3016 RepID=H6NDI2_9BACL
major facilitator transporter Tax=RBG_16_RIF_CHLX_72_14_curated
arabinose efflux permease family protein
13_1_40cm_scaffold_590_11
Anaerolinea thermophila, Anaerolinea, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(10249..11265)
DNA (1017bp) protein (339aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8MZT4_ANATU
putative ABC transporter ATP-binding protein
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAJ62269.1}; TaxID=926569 species="Bacteria; Chloroflexi; Anaerolineae; Anaerolineales; Anaerolineaceae; Anaerolinea.;" source="Anaerolin
13_1_40cm_scaffold_590_12
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

11357..12013
DNA (657bp) protein (219aa)
hypothetical protein id=14629092 bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein Tax=CSP1_4_Chloroflexi
alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
13_1_40cm_scaffold_590_13
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(12045..12761)
DNA (717bp) protein (239aa)
DNA-methyltransferase id=24513418 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
DNA-methyltransferase Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
DNA-methyltransferase
13_1_40cm_scaffold_590_14
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(12876..14783)
DNA (1908bp) protein (636aa)
UvrABC system protein C; K03703 excinuclease ABC subunit C id=24513419 bin=RBG_19FT_COMBO_GAL15_69_19 species=Desulfotomaculum carboxydivorans genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
UvrABC system protein C; K03703 excinuclease ABC subunit C Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
UvrABC system protein C
Displaying 18 items

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