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13_1_40cm_scaffold_7

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_7_1
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

1..1443
DNA (1443bp) protein (481aa)
hypothetical protein id=14631101 bin=bin9_gal15 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
hypothetical protein Tax=CSP1_3_Armatimonadetes
hypothetical protein
13_1_40cm_scaffold_7_2
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

1878..2330
DNA (453bp) protein (151aa)
pilin, type IV id=24502489 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
pilin, type IV Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
secretion system protein G
13_1_40cm_scaffold_7_3
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2430..3008
DNA (579bp) protein (193aa)
TPR repeat-containing protein n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M0J9_GEODF
hypothetical protein
TPR domain protein {ECO:0000313|EMBL:ACM19036.1}; TaxID=316067 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (stra
13_1_40cm_scaffold_7_4
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

2992..4383
DNA (1392bp) protein (464aa)
hypothetical protein id=24502488 bin=RBG_19FT_COMBO_GAL15_69_19 species=Eubacterium limosum genus=Eubacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
hypothetical protein Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
hypothetical protein
13_1_40cm_scaffold_7_5
RBG_16_Zixibacteria_50_21_curated, Zixibacteria, Bacteria

Not on your lists

comp(4535..5932)
DNA (1398bp) protein (466aa)
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase Tax=RBG_16_Zixibacteria_50_21_curated
glycosyltransferase
glycosyltransferase id=5241172 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
13_1_40cm_scaffold_7_6
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

6167..8266
DNA (2100bp) protein (700aa)
O-Antigen ligase id=24502487 bin=RBG_19FT_COMBO_GAL15_69_19 species=Thermoanaerobacterium thermosaccharolyticum genus=Thermoanaerobacterium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
O-Antigen ligase Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
O-antigen polymerase
13_1_40cm_scaffold_7_7
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

8263..9501
DNA (1239bp) protein (413aa)
Glycosyl transferase group 1 n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C274_SPHTD
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:ACZ38341.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;"
13_1_40cm_scaffold_7_8
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9506..10639)
DNA (1134bp) protein (378aa)
hypothetical protein n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI00035CD8D4
Glycosyl transferase family 1 {ECO:0000313|EMBL:KEA04740.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;
group 1 glycosyl transferase
13_1_40cm_scaffold_7_9
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

comp(10636..11925)
DNA (1290bp) protein (430aa)
Glycosyl transferase group 1 id=3927362 bin=GWC2_Nitrospirae-rel_56_14 species=Candidatus Micrarchaeum acidiphilum genus=Candidatus Micrarchaeum taxon_order=unknown taxon_class=unknown phylum=Euryarchaeota tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
glycosyl transferase group 1 protein Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
RfaG; glycosyltransferase
13_1_40cm_scaffold_7_10
GWF2_CPR3_35_18, CPR3, Bacteria

Not on your lists

comp(11922..13361)
DNA (1440bp) protein (480aa)
Polysaccharide biosynthesis protein id=3064607 bin=GWF2_CPR3_35_18 species=Methanobacterium formicicum genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=GWF2_CPR3_35_18 organism_group=CPR3
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:KKP70324.1}; TaxID=1618350 species="Bacteria; candidate division CPR3.;" source="candidate division CPR3 bacterium GW2011_GWF2_35_18.;"
polysaccharide biosynthesis protein
13_1_40cm_scaffold_7_11
R_OP11_43_14, Microgenomates, Bacteria

Not on your lists

comp(13364..14569)
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CMD5_9BACT
DegT/DnrJ/EryC1/StrS aminotransferase; K12452 CDP-6-deoxy-D-xylo-4-hexulose-3-dehydrase Tax=RIFCSPLOWO2_01_FULL_OP11_43_14_curated
CDP-4-dehydro-6-deoxy-D-glucose 3-dehydratase
13_1_40cm_scaffold_7_12
R_OD1_Falkowbacteria_39_17, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(14566..15534)
DNA (969bp) protein (323aa)
NAD-dependent epimerase/dehydratase; K01711 GDPmannose 4,6-dehydratase [EC:4.2.1.47] Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_39_17_curated
GDPmannose 4,6-dehydratase (EC:4.2.1.47)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI00036CBF57
13_1_40cm_scaffold_7_13
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

16191..17603
DNA (1413bp) protein (471aa)
UDP-phosphate glucose phosphotransferase (EC:2.7.8.-) id=24502483 bin=RBG_19FT_COMBO_GAL15_69_19 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
UDP-phosphate glucose phosphotransferase (EC:2.7.8.-) Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
UDP-phosphate glucose phosphotransferase (EC:2.7.8.-)
13_1_40cm_scaffold_7_14
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

17695..18957
DNA (1263bp) protein (421aa)
group 1 glycosyl transferase id=24502482 bin=RBG_19FT_COMBO_GAL15_69_19 species=Desulfotomaculum ruminis genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
group 1 glycosyl transferase Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
glycosyl transferase group 1
13_1_40cm_scaffold_7_15
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

18947..19951
DNA (1005bp) protein (335aa)
ATPase; K03924 MoxR-like ATPase [EC:3.6.3.-] id=24502481 bin=RBG_19FT_COMBO_GAL15_69_19 species=Bacillus sp. NRRL B-14911 genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
ATPase; K03924 MoxR-like ATPase [EC:3.6.3.-] Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
ATPase
13_1_40cm_scaffold_7_16
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

20037..21260
DNA (1224bp) protein (408aa)
hypothetical protein id=24502480 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Armatimonadetes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
hypothetical protein Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
hypothetical protein
13_1_40cm_scaffold_7_17
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

21236..23368
DNA (2133bp) protein (711aa)
transglutaminase id=14632322 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin9_gal15 organism_group=GAL15
transglutaminase Tax=CSP1_3_Armatimonadetes
hypothetical protein
13_1_40cm_scaffold_7_18
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

23417..24175
DNA (759bp) protein (253aa)
type 4 prepilin peptidase 1 (EC:3.4.23.43); K02654 leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] id=24502477 bin=RBG_19FT_COMBO_GAL15_69_19 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
type 4 prepilin peptidase 1 (EC:3.4.23.43); K02654 leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
pilD; type 4 prepilin-like proteins leader peptide-processing enzyme PilD (EC:3.4.23.43)
13_1_40cm_scaffold_7_19
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

24753..25868
DNA (1116bp) protein (372aa)
type IV pilus assembly protein PilM; K02662 type IV pilus assembly protein PilM Tax=CSP1_3_Armatimonadetes
type IV pilus assembly protein PilM; K02662 type IV pilus assembly protein PilM id=14631905 bin=bin9_gal15 species=Meiothermus timidus genus=Meiothermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=bin9_gal15 organism_group=GAL15
type IV pilus assembly protein PilM
13_1_40cm_scaffold_7_20
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

25865..26425
DNA (561bp) protein (187aa)
fimbrial assembly family protein; K02663 type IV pilus assembly protein PilN id=14631904 bin=bin9_gal15 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
fimbrial assembly family protein; K02663 type IV pilus assembly protein PilN Tax=CSP1_3_Armatimonadetes
hypothetical protein
13_1_40cm_scaffold_7_21
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

26422..27003
DNA (582bp) protein (194aa)
Tfp pilus assembly protein PilO id=24455927 bin=RBG_19FT_COMBO_GAL15_69_19 species=Halobacteroides halobius genus=Halobacteroides taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
Tfp pilus assembly protein PilO Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
pilus assembly protein PilO
13_1_40cm_scaffold_7_22
unknown

Not on your lists

comp(27345..27623)
DNA (279bp) protein (93aa)

This feature has no annotations

13_1_40cm_scaffold_7_23
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

27643..29325
DNA (1683bp) protein (561aa)
type II and III secretion system protein id=24455930 bin=RBG_19FT_COMBO_GAL15_69_19 species=Phascolarctobacterium sp. CAG:266 genus=Phascolarctobacterium taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
type II and III secretion system protein Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
type II and III secretion system protein
13_1_40cm_scaffold_7_24
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

29344..29757
DNA (414bp) protein (138aa)
id=24455931 bin=RBG_19FT_COMBO_GAL15_69_19 tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
id=24455931 Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
13_1_40cm_scaffold_7_25
RBG_16_Acidobacteria_64_8_curated, Acidobacteria, Bacteria

Not on your lists

30328..30855
DNA (528bp) protein (176aa)
id=24502475 bin=RBG_19FT_COMBO_GAL15_69_19 tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
id=24502475 Tax=RBG_16_Acidobacteria_64_8_curated
13_1_40cm_scaffold_7_26
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

30852..31460
DNA (609bp) protein (203aa)
id=24502474 bin=RBG_19FT_COMBO_GAL15_69_19 tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
id=24502474 Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
13_1_40cm_scaffold_7_27
RBG_16_Acidobacteria_64_8_curated, Acidobacteria, Bacteria

Not on your lists

31457..32221
DNA (765bp) protein (255aa)
hypothetical protein Tax=RBG_16_Acidobacteria_64_8_curated
hypothetical protein id=24502473 bin=RBG_19FT_COMBO_GAL15_69_19 tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
13_1_40cm_scaffold_7_28
RBG_16_Acidobacteria_64_8_curated, Acidobacteria, Bacteria

Not on your lists

32247..33920
DNA (1674bp) protein (558aa)
Tax=RBG_16_Acidobacteria_64_8_curated
13_1_40cm_scaffold_7_29
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

34612..36009
DNA (1398bp) protein (466aa)
Cell surface protein {ECO:0000313|EMBL:AKB58387.1}; TaxID=1434106 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina bark
collagen triple helix repeat domain protein
hypothetical protein id=24518186 bin=RBG_19FT_COMBO_GAL15_69_19 species=Methanosarcina mazei genus=Methanosarcina taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
13_1_40cm_scaffold_7_30
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

36164..37225
DNA (1062bp) protein (354aa)
peptidase M24 id=24455933 bin=RBG_19FT_COMBO_GAL15_69_19 species=Paenibacillus mucilaginosus genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
peptidase M24 Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
yqhT; Xaa-Pro dipeptidase
Displaying items 1-30 of 45 in total

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