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13_1_40cm_scaffold_72

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_72_1
CG_Arma_02, Armatimonadetes, Bacteria

Not on your lists

comp(1..381)
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3863
RNA polymerase, sigma 29 subunit, SigE Tax=CG_Arma_02
ECF subfamily RNA polymerase sigma-24 factor
13_1_40cm_scaffold_72_2
unknown

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comp(432..821)
DNA (390bp) protein (130aa)

This feature has no annotations

13_1_40cm_scaffold_72_3
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

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983..2422
DNA (1440bp) protein (480aa)
acnA; aconitate hydratase 1 (EC:4.2.1.3); K01681 aconitate hydratase 1 [EC:4.2.1.3] id=24505490 bin=RBG_19FT_COMBO_GAL15_69_19 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
acnA; aconitate hydratase 1 (EC:4.2.1.3); K01681 aconitate hydratase 1 [EC:4.2.1.3] Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
aconitate hydratase 1
13_1_40cm_scaffold_72_4
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

2376..3638
DNA (1263bp) protein (421aa)
acnA; aconitate hydratase 1 (EC:4.2.1.3); K01681 aconitate hydratase 1 [EC:4.2.1.3] Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
acnA; aconitate hydratase 1 (EC:4.2.1.3); K01681 aconitate hydratase 1 [EC:4.2.1.3] id=24505490 bin=RBG_19FT_COMBO_GAL15_69_19 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
acnA; aconitate hydratase 1 (EC:4.2.1.3)
13_1_40cm_scaffold_72_5
unknown

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comp(3775..3927)
DNA (153bp) protein (51aa)

This feature has no annotations

13_1_40cm_scaffold_72_6
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(4081..5217)
DNA (1137bp) protein (379aa)
Permeases of the major facilitator superfamily n=1 Tax=Thermoanaerobacter tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) RepID=Q8R9S3_THETN
ProP6; major facilitator superfamily permease
Permeases of the major facilitator superfamily {ECO:0000313|EMBL:AAM24732.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.
13_1_40cm_scaffold_72_7
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(5405..5695)
DNA (291bp) protein (97aa)
hypothetical protein id=14633025 bin=bin9_gal15 species=Thioalkalivibrio thiocyanoxidans genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
hypothetical protein Tax=CSP1_3_Armatimonadetes
vitamin K epoxide reductase
13_1_40cm_scaffold_72_8
unknown

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comp(5695..6255)
DNA (561bp) protein (187aa)

This feature has no annotations

13_1_40cm_scaffold_72_9
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

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6346..7317
DNA (972bp) protein (324aa)
6-phosphofructokinase (EC:2.7.1.11); K00850 6-phosphofructokinase [EC:2.7.1.11] id=24484807 bin=RBG_19FT_COMBO_GAL15_69_19 species=Meiothermus silvanus genus=Meiothermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
6-phosphofructokinase (EC:2.7.1.11); K00850 6-phosphofructokinase [EC:2.7.1.11] Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
6-phosphofructokinase (EC:2.7.1.11)
13_1_40cm_scaffold_72_10

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comp(7310..8431)
DNA (1122bp) protein (374aa)
Transposase, IS605 OrfB family n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8K931_NITWC
Marine sediment metagenome DNA, contig: S01H4_L00267 {ECO:0000313|EMBL:GAG56486.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
IS605 OrfB family transposase
13_1_40cm_scaffold_72_11
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

8494..9651
DNA (1158bp) protein (386aa)
lacD; Tagatose 1,6-diphosphate aldolase; K01635 tagatose 1,6-diphosphate aldolase [EC:4.1.2.40] id=14632725 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin9_gal15 organism_group=GAL15
lacD; Tagatose 1,6-diphosphate aldolase; K01635 tagatose 1,6-diphosphate aldolase [EC:4.1.2.40] Tax=CSP1_3_Armatimonadetes
lacD; Tagatose 1,6-diphosphate aldolase
13_1_40cm_scaffold_72_12
unknown

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9667..9882
DNA (216bp) protein (72aa)

This feature has no annotations

13_1_40cm_scaffold_72_13
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

10012..11241
DNA (1230bp) protein (410aa)
FAD dependent oxidoreductase id=24484812 bin=RBG_19FT_COMBO_GAL15_69_19 species=Mycobacterium sp. 155 genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
FAD dependent oxidoreductase Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
FAD dependent oxidoreductase
13_1_40cm_scaffold_72_14

Not on your lists

11398..12480
DNA (1083bp) protein (361aa)
Class II aldolase/adducin family protein n=1 Tax=uncultured prokaryote RepID=H5SI39_9ZZZZ
Class II aldolase/adducin family protein {ECO:0000313|EMBL:BAL55825.1}; TaxID=198431 species="unclassified sequences; environmental samples.;" source="uncultured prokaryote.;"
class II aldolase/adducin family protein
13_1_40cm_scaffold_72_15
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

12563..13789
DNA (1227bp) protein (409aa)
alcohol dehydrogenase GroES domain-containing protein id=14631110 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin9_gal15 organism_group=GAL15
alcohol dehydrogenase GroES domain-containing protein Tax=CSP1_3_Armatimonadetes
alcohol dehydrogenase GroES domain-containing protein
13_1_40cm_scaffold_72_16
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(13859..15133)
DNA (1275bp) protein (425aa)
glutamate dehydrogenase (EC:1.4.1.3); K00261 glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] id=14633133 bin=bin9_gal15 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
glutamate dehydrogenase (EC:1.4.1.3); K00261 glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] Tax=CSP1_3_Armatimonadetes
Glu/Leu/Phe/Val dehydrogenase
13_1_40cm_scaffold_72_17
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(15216..16334)
DNA (1119bp) protein (373aa)
hypothetical protein Tax=CSP1_3_Armatimonadetes
hypothetical protein id=14632827 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin9_gal15 organism_group=GAL15
hypothetical protein
13_1_40cm_scaffold_72_trna_1
unknown

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16483..16566
DNA (84bp)
transferRNA
13_1_40cm_scaffold_72_trna_2
unknown

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16647..16717
DNA (71bp)
transferRNA
13_1_40cm_scaffold_72_18
unknown

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comp(16729..17127)
DNA (399bp) protein (133aa)

This feature has no annotations

13_1_40cm_scaffold_72_19
unknown

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17338..17448
DNA (111bp) protein (37aa)

This feature has no annotations

13_1_40cm_scaffold_72_20
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(18047..19108)
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA00_GEMAT
Glutathione synthase/ribosomal protein S6 modification enzyme (Glutaminyl transferase) {ECO:0000313|EMBL:CDM64421.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrino
hypothetical protein
13_1_40cm_scaffold_72_21
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

19672..20406
DNA (735bp) protein (245aa)
DtxR family iron (metal) dependent repressor; K03709 DtxR family transcriptional regulator, Mn-dependent transcriptional regulator Tax=RBG_16_Armatimonadetes_67_12_curated
FeoA family protein; K03709 DtxR family transcriptional regulator, Mn-dependent transcriptional regulator id=24518456 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
Iron dependent repressor
13_1_40cm_scaffold_72_22
BJP_IG2158_Anaerolineales_38_74, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(20441..22477)
DNA (2037bp) protein (679aa)
PAS domain S-box/uncharacterized domain HDIG id=24531792 bin=RBG_19FT_COMBO_GAL15_69_19 species=Chthonomonas calidirosea genus=Chthonomonas taxon_order=Chthonomonadales taxon_class=Chthonomonadetes phylum=Armatimonadetes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
PAS domain S-box/uncharacterized domain HDIG
Tax=BJP_IG2158_Anaerolineales_38_74
13_1_40cm_scaffold_72_23
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22570..23436
DNA (867bp) protein (289aa)
methylenetetrahydrofolate dehydrogenase (EC:1.5.1.5)
methylenetetrahydrofolate dehydrogenase (EC:1.5.1.5); K01491 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] Tax=RIFCSPLOWO2_02_FULL_Gall
Bifunctional protein FolD n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CRJ6_SIDLE
13_1_40cm_scaffold_72_24
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

23446..24804
DNA (1359bp) protein (453aa)
bifunctional folylpolyglutamate synthase/dihydrofolate synthase; K11754 dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] id=24484833 bin=RBG_19FT_COMBO_GAL15_69_19 species=Desulfotomaculum acetoxidans genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
bifunctional folylpolyglutamate synthase/dihydrofolate synthase; K11754 dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
bifunctional folylpolyglutamate synthase/dihydrofolate synthase
13_1_40cm_scaffold_72_25
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

24851..26452
DNA (1602bp) protein (534aa)
lysyl-tRNA synthetase, class I (EC:6.1.1.6) id=24484832 bin=RBG_19FT_COMBO_GAL15_69_19 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
lysyl-tRNA synthetase, class I (EC:6.1.1.6) Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
lysyl-tRNA synthetase, class I (EC:6.1.1.6)
13_1_40cm_scaffold_72_26
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

26456..27415
DNA (960bp) protein (320aa)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein id=14631013 bin=bin9_gal15 species=Sporomusa ovata genus=Sporomusa taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=bin9_gal15 organism_group=GAL15
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein Tax=CSP1_3_Armatimonadetes
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit
13_1_40cm_scaffold_72_27
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

27512..29602
DNA (2091bp) protein (697aa)
translation elongation factor 2 (EF-2/EF-G) Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
translation elongation factor 2 (EF-2/EF-G) id=24557153 bin=RBG_19FT_COMBO_GAL15_69_19 species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
translation elongation factor G
13_1_40cm_scaffold_72_28
unknown

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29654..29881
DNA (228bp) protein (76aa)

This feature has no annotations

Displaying items 1-30 of 41 in total

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