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13_1_40cm_scaffold_1140

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_1140_1
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

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1..1392
DNA (1392bp) protein (464aa)
metG; methionyl-tRNA synthetase MetG (EC:6.1.1.10) id=24439011 bin=RBG_19FT_COMBO_GAL15_69_19 species=Acetonema longum genus=Acetonema taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
metG; methionyl-tRNA synthetase MetG (EC:6.1.1.10) Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
Methionyl-tRNA synthetase (EC:6.1.1.10)
13_1_40cm_scaffold_1140_2
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

1520..2284
DNA (765bp) protein (255aa)
TatD family hydrolase; K03424 TatD DNase family protein [EC:3.1.21.-] id=24439010 bin=RBG_19FT_COMBO_GAL15_69_19 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
TatD family hydrolase; K03424 TatD DNase family protein [EC:3.1.21.-] Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
TatD; Mg-dependent DNase
13_1_40cm_scaffold_1140_3
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

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2289..3371
DNA (1083bp) protein (361aa)
Peptidase family M48 id=24439009 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
Peptidase family M48 Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
peptidase M48 Ste24p
13_1_40cm_scaffold_1140_4
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

3506..4039
DNA (534bp) protein (178aa)
2-phosphosulfolactate phosphatase (EC:3.1.3.71) id=24439008 bin=RBG_19FT_COMBO_GAL15_69_19 species=Chthonomonas calidirosea genus=Chthonomonas taxon_order=Chthonomonadales taxon_class=Chthonomonadetes phylum=Armatimonadetes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
2-phosphosulfolactate phosphatase; K05979 2-phosphosulfolactate phosphatase [EC:3.1.3.71] Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
2-phosphosulfolactate phosphatase
13_1_40cm_scaffold_1140_5
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(4106..4534)
DNA (429bp) protein (143aa)
hypothetical protein id=24416820 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
hypothetical protein Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
hypothetical protein
13_1_40cm_scaffold_1140_6
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

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4555..5391
DNA (837bp) protein (279aa)
id=14632371 bin=bin9_gal15 tax=bin9_gal15 organism_group=GAL15
Tax=CSP1_3_Armatimonadetes
13_1_40cm_scaffold_1140_7
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(5451..5984)
DNA (534bp) protein (178aa)
id=14633022 bin=bin9_gal15 tax=bin9_gal15 organism_group=GAL15
Tax=CSP1_3_Armatimonadetes
13_1_40cm_scaffold_1140_8
RBG_13_Chloroflexi_60_13_curated, Chloroflexi, Bacteria

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6622..7245
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00037E4392
hypothetical protein Tax=RBG_13_Chloroflexi_60_13_curated
hypothetical protein
13_1_40cm_scaffold_1140_trna_1
unknown

Not on your lists

comp(8238..8310)
DNA (73bp)
transferRNA
13_1_40cm_scaffold_1140_9
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

8882..10399
DNA (1518bp) protein (506aa)
replicative DNA helicase id=24416824 bin=RBG_19FT_COMBO_GAL15_69_19 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
replicative DNA helicase Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
replicative DNA helicase
13_1_40cm_scaffold_1140_10
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

10530..10946
DNA (417bp) protein (139aa)
id=24416825 bin=RBG_19FT_COMBO_GAL15_69_19 tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
id=24416825 Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
13_1_40cm_scaffold_1140_11
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

11082..11360
DNA (279bp) protein (93aa)
id=24416827 bin=RBG_19FT_COMBO_GAL15_69_19 tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
id=24416827 Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
13_1_40cm_scaffold_1140_12
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

11360..11707
DNA (348bp) protein (116aa)
id=24416828 bin=RBG_19FT_COMBO_GAL15_69_19 tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
id=24416828 Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
13_1_40cm_scaffold_1140_13
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(11640..12866)
DNA (1227bp) protein (409aa)
major facilitator transporter id=14632909 bin=bin9_gal15 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
major facilitator transporter Tax=CSP1_3_Armatimonadetes
major facilitator transporter
13_1_40cm_scaffold_1140_14
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

12998..13738
DNA (741bp) protein (247aa)
putative phosphoesterase id=24416831 bin=RBG_19FT_COMBO_GAL15_69_19 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
putative phosphoesterase Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
putative phosphoesterase
13_1_40cm_scaffold_1140_15
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

13832..15901
DNA (2070bp) protein (690aa)
peptidase S9 prolyl oligopeptidase active site domain-containing protein id=24416832 bin=RBG_19FT_COMBO_GAL15_69_19 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
peptidase S9 prolyl oligopeptidase active site domain-containing protein Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
peptidase S9 prolyl oligopeptidase active site domain-containing protein
13_1_40cm_scaffold_1140_16
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

15898..16491
DNA (594bp) protein (198aa)
ATP/cobalamin adenosyltransferase (EC:2.5.1.17) id=24416833 bin=RBG_19FT_COMBO_GAL15_69_19 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
ATP/cobalamin adenosyltransferase (EC:2.5.1.17) Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
ATP--cobalamin adenosyltransferase
13_1_40cm_scaffold_1140_17
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

16685..17962
DNA (1278bp) protein (426aa)
hypothetical protein id=24416836 bin=RBG_19FT_COMBO_GAL15_69_19 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
hypothetical protein Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
major facilitator superfamily protein
13_1_40cm_scaffold_1140_18
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(18006..18356)
DNA (351bp) protein (117aa)
frdD; Fumarate reductase subunit D (EC:1.3.99.1) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
frdD; Fumarate reductase subunit D; K00247 fumarate reductase subunit D id=14631500 bin=bin9_gal15 species=Rhodococcus imtechensis genus=Rhodococcus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin9_gal15 organism_group=GAL15
frdD; fumarate reductase subunit D
13_1_40cm_scaffold_1140_19
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(18360..18743)
DNA (384bp) protein (128aa)
frdC; Putative fumarate reductase [membrane anchor subunit] FrdC (fumarate dehydrogenase) (fumaric hydrogenase) (EC:1.3.99.1) id=14631499 bin=bin9_gal15 species=Rhodococcus imtechensis genus=Rhodococcus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin9_gal15 organism_group=GAL15
frdC; Putative fumarate reductase [membrane anchor subunit] FrdC (fumarate dehydrogenase) (fumaric hydrogenase) (EC:1.3.99.1) Tax=CSP1_3_Armatimonadetes
frdC; Putative fumarate reductase [membrane anchor subunit] FrdC (fumarate dehydrogenase) (fumaric hydrogenase) (EC:1.3.99.1)
13_1_40cm_scaffold_1140_20
RLO_PLX_64_10, Bacteria

Not on your lists

comp(18740..19003)
DNA (264bp) protein (88aa)
frdBC; putative fumarate reductase; K00245 fumarate reductase iron-sulfur subunit [EC:1.3.99.1] Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
frdB; Fumarate reductase (anaerobic), Fe-S subunit (EC:1.3.99.1) id=14631498 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
succinate dehydrogenase iron-sulfur protein
Displaying 21 items

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