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13_1_40cm_scaffold_1295

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_1295_1
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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1..657
DNA (657bp) protein (219aa)
Predicted membrane protein n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2SN04_HAHCH id=5223413 bin=16ft_combo_ws3_JS1 species=Hahella chejuensis genus=Hahella taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein Tax=RBG_16_RIF_WS3X_71_46_curated
protein of unknown function DUF989
13_1_40cm_scaffold_1295_2
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

689..1174
DNA (486bp) protein (162aa)
hypothetical protein; K09129 hypothetical protein id=24470230 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
hypothetical protein; K09129 hypothetical protein Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
hypothetical protein
13_1_40cm_scaffold_1295_3
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(1162..2205)
DNA (1044bp) protein (348aa)
integral membrane sensor signal transduction histidine kinase (EC:2.7.13.3); K02484 two-component system, OmpR family, sensor kinase [EC:2.7.13.3] Tax=RBG_16_Chloroflexi_63_12_curated
histidine kinase (EC:2.7.13.3); K02484 two-component system, OmpR family, sensor kinase [EC:2.7.13.3] id=1247318 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
histidine kinase (EC:2.7.13.3)
13_1_40cm_scaffold_1295_4
RBG_13_Chloroflexi_66_10_curated, Chloroflexi, Bacteria

Not on your lists

comp(2316..2996)
DNA (681bp) protein (227aa)
Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SQV1_9BACT id=1247317 bin=RBG9 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG9 organism_group=Chloroflexi
winged helix family two component transcriptional regulator Tax=RBG_13_Chloroflexi_66_10_curated
OmpR family two-component response regulator
13_1_40cm_scaffold_1295_5
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(3090..3455)
DNA (366bp) protein (122aa)
transmembrane_regions 9..31 Tax=RBG_16_Chloroflexi_56_8_curated
13_1_40cm_scaffold_1295_6
unknown

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comp(3567..4499)
DNA (933bp) protein (311aa)

This feature has no annotations

13_1_40cm_scaffold_1295_7
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4603..6072)
DNA (1470bp) protein (490aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
Putative uncharacterized protein id=1748509 bin=GWD2_Deltaproteobacteria_55_8 species=Acidothermus cellulolyticus genus=Acidothermus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
13_1_40cm_scaffold_1295_8
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(6393..7181)
DNA (789bp) protein (263aa)
ABC transporter n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2AFDE
putative ABC transporter ATP-binding and permease; K01992 ABC-2 type transport system permease protein Tax=RBG_16_Nitrospirae_64_22_curated
putative ABC transporter ATP-binding and permease
13_1_40cm_scaffold_1295_9
GWA1_OP11_47_8_very_partial, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(7178..7921)
DNA (744bp) protein (248aa)
ABC transporter ATP-binding protein (EC:3.6.3.-)
ABC-type transport system, ATP-binding component n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PID8_9BACT
ABC transporter, ATPase subunit {ECO:0000313|EMBL:KKU80846.1}; Flags: Fragment;; TaxID=1618438 species="Bacteria; Microgenomates.;" source="Microgenomates (Gottesmanbacteria) bacterium GW2011_GWA1_47_
13_1_40cm_scaffold_1295_10
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7918..9162)
DNA (1245bp) protein (415aa)
Uncharacterized protein n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q092R3_STIAD
Chromosome segregation ATPase {ECO:0000313|EMBL:KFE71922.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source
hypothetical protein
13_1_40cm_scaffold_1295_11
Halothermothrix orenii, Halothermothrix, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9174..9734)
DNA (561bp) protein (187aa)
Predicted membrane protein n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8CX32_HALOH
hypothetical protein
Riboflavin transporter {ECO:0000256|PIRNR:PIRNR037778}; TaxID=373903 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halothermothrix.;" source="Halothermothrix orenii (st
13_1_40cm_scaffold_1295_12
Carboxydothermus hydrogenoformans, Carboxydothermus, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9742..10545)
DNA (804bp) protein (268aa)
folP; dihydropteroate synthase (EC:2.5.1.15)
Dihydropteroate synthase {ECO:0000256|RuleBase:RU361205}; Short=DHPS {ECO:0000256|RuleBase:RU361205};; EC=2.5.1.15 {ECO:0000256|RuleBase:RU361205};; Dihydropteroate pyrophosphorylase {ECO:0000256|Rule
Dihydropteroate synthase n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3A9K4_CARHZ
13_1_40cm_scaffold_1295_13
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(10685..11833)
DNA (1149bp) protein (383aa)
hypothetical protein id=24436280 bin=RBG_19FT_COMBO_GAL15_69_19 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
hypothetical protein Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
Phosphomannose isomerase
13_1_40cm_scaffold_1295_14
Tolypothrix bouteillei, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(11931..12725)
DNA (795bp) protein (265aa)
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI00034DEB7F
Methyltransferase {ECO:0000313|EMBL:KIE09136.1}; TaxID=1479485 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix bouteillei VB521301.;"
methyltransferase type 12
13_1_40cm_scaffold_1295_15
Deinococcus peraridilitoris, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(12746..14134)
DNA (1389bp) protein (463aa)
Arabinose efflux permease family protein n=1 Tax=Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200) RepID=K9ZYM4_DEIPD
arabinose efflux permease family protein
Arabinose efflux permease family protein {ECO:0000313|EMBL:AFZ66304.1}; Flags: Precursor;; TaxID=937777 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;
13_1_40cm_scaffold_1295_16
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(14143..15096)
DNA (954bp) protein (318aa)
Sugar kinases, ribokinase family id=14632602 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin9_gal15 organism_group=GAL15
Sugar kinases, ribokinase family Tax=CSP1_3_Armatimonadetes
Sugar kinases, ribokinase family
13_1_40cm_scaffold_1295_17
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(15109..16053)
DNA (945bp) protein (315aa)
fructose-1-phosphate kinase; K00882 1-phosphofructokinase [EC:2.7.1.56] id=24436281 bin=RBG_19FT_COMBO_GAL15_69_19 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
fructose-1-phosphate kinase; K00882 1-phosphofructokinase [EC:2.7.1.56] Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
1-phosphofructokinase
13_1_40cm_scaffold_1295_18
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(16050..17273)
DNA (1224bp) protein (408aa)
ribulose-bisphosphate carboxylase (EC:4.1.1.39); K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] id=24436278 bin=RBG_19FT_COMBO_GAL15_69_19 species=Methanofollis liminatans genus=Methanofollis taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
ribulose-bisphosphate carboxylase (EC:4.1.1.39); K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
ribulose-bisphosphate carboxylase (EC:4.1.1.39)
13_1_40cm_scaffold_1295_19
bacterium UASB270, Bacteria

Not on your lists

17547..18851
DNA (1305bp) protein (435aa)
Uncharacterized ABC transporter extracellular-binding protein PH1214 n=1 Tax=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) RepID=Y1214_PYRHO
Extracellular solute-binding protein, family 1 {ECO:0000313|EMBL:GAK61579.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
hypothetical protein
13_1_40cm_scaffold_1295_20
bacterium UASB270, Bacteria

Not on your lists

18904..19782
DNA (879bp) protein (293aa)
Probable ABC transporter permease protein PH1215 n=1 Tax=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) RepID=Y1215_PYRHO
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:GAK61580.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
sugar-binding transport system permease
13_1_40cm_scaffold_1295_21
bacterium UASB270, Bacteria

Not on your lists

19779..20594
DNA (816bp) protein (272aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Staphylothermus hellenicus (strain DSM 12710 / JCM 10830 / BK20S6-10-b1 / P8) RepID=D7D9X5_STAHD
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:GAK61581.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
binding-protein-dependent transport systems inner membrane component
13_1_40cm_scaffold_1295_22
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20673..20861)
DNA (189bp) protein (63aa)
glycoside hydrolase 15-related (EC:3.2.1.3); K01178 glucoamylase [EC:3.2.1.3] Tax=GWD2_Deltaproteobacteria_55_8_curated
Glycoside hydrolase 15-related id=1945566 bin=GWD2_Deltaproteobacteria_55_8 species=Nostoc punctiforme genus=Nostoc taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
glucan 1,4-alpha-glucosidase
Displaying 22 items

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