ggKbase home page

13_1_40cm_scaffold_524_23

Organism: 13_1_40CM_Armatimonadetes_64_14

near complete RP 43 / 55 MC: 1 BSCG 45 / 51 ASCG 12 / 38
Location: 22546..23916

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-54 subunit RpoN; K03092 RNA polymerase sigma-54 factor id=24398210 bin=RBG_19FT_COMBO_GAL15_69_19 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate similarity UNIREF
DB: UNIREF100
  • Identity: 74.8
  • Coverage: 445.0
  • Bit_score: 665
  • Evalue 3.20e-188
RNA polymerase sigma-54 subunit RpoN; K03092 RNA polymerase sigma-54 factor Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 74.8
  • Coverage: 445.0
  • Bit_score: 665
  • Evalue 4.50e-188
RNA polymerase sigma-54 subunit RpoN similarity KEGG
DB: KEGG
  • Identity: 37.6
  • Coverage: 450.0
  • Bit_score: 272
  • Evalue 2.20e-70

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_19FT_COMBO_Armatimonadetes_69_19_curated → Armatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1371
GTGTCGACGACCCCGCGCATGCACACCACGGTGGGTGTCACCACCGGACTGCACCAGCGCATGGTGCCGAAGCTGATGATGGTGAATGCGCTGTTGGTCCTGCCGTTGAACCAGTTGCTCTCCCGCATTGAGCAGGAGCTGTCCGAGAACCCTGCTTTGGAACTGGACGAAAAACCCGCCTCCCCGGAGTCAGACTGGACCCCGGGGGAGGGTGGGCAGTCGCTCACGAGCTGGACCCCCGATGAGGAAGAGTTCGATCCCTTCTCGCGGATGGCCGCCCCGGTCTCGCTGCAGGAGCATTTGCTGATGACCCTGCAGGCGCAAGGGCTCTCCGCGCGCGATCATGCCATCGGCGAGCGGCTCCTGGGCTATATCAACGAGAACGGGTACCTGGAAGCGTCCCCCGCACAGGTCGCCCAGGAGCTCAACGCGGAAGTGGAAGAAGTCGAGGCCGTCTTGGGCCGCATCCAGCGCTTTGAGCCTGTGGGCGTCGGGGCCCGCAATGTGGAAGAGTGCTTACTCCTGCAGCTGCGTGTGATGGAATCGACCGCGGTCAATCGTCTCGCCCAGCGCATTGTGGAGACGTACCTGCCCGATCTCGCCGCCCACCGGTTTGACAAAGTGGCCAAGGCGGTGGACGCGACCGTGACCGAGGTCAAAGACGCCCACGAGTTTGTGAAAGCGAGTTGCTACCCGTACCCCGGCGAGCAGTATCGCAGCGACCAAGACGGCGGACGGGTCCGACCCGCTGAGATCGCCCGGCCGGATGCCATCGTGCGCCGCACAGACGATGGATTTGTGATTGAGTTGTGCCGCCAAAATGCGTTCGCGCTGCGCGTGAACGCATTCTATGACGACTTGCGCCGACAAATGCGCCGCGCGTCCGCGGGCTACTCCGACGAATCCCGCGGGCACGTGCGGGATTATGTGAACCGGGCCAAGCTATTTATCGACGCCCTCCAGCGCCGGAACTGGACCTTTGCCAATATCGTGGAGGCCATTGTGCGCACACAGTGGGAGTTCATCGAGCGCGGGGATGCCCACTTGAAACCGTTGACCAAGGCGATGATCGCCGCGGAGCTGGGAGTCAGCGAATCCACGGTGAGCCGGGCGCTCGATGGGAAGTTCGTGCAGTTGCCCCCCACCGGACGCGTGGTGAGTTTCGATCTCTTCTTTGATCAGTCGTTGCCGACGAAAGACCGGATCCGCGAGATCGTTGCTGCCGAACCCCGCCCGCTCACCGACGAGGAGATTGCGGTCCAGCTGACCTCCGAAGGGATCAAGATCGCACGGCGCACGGTGACCAAATACCGCGAGGAAATCAACATTCCGCCGTCCACCACCCGCGGGCCCATGGCGGCCAGCTCCTAG
PROTEIN sequence
Length: 457
VSTTPRMHTTVGVTTGLHQRMVPKLMMVNALLVLPLNQLLSRIEQELSENPALELDEKPASPESDWTPGEGGQSLTSWTPDEEEFDPFSRMAAPVSLQEHLLMTLQAQGLSARDHAIGERLLGYINENGYLEASPAQVAQELNAEVEEVEAVLGRIQRFEPVGVGARNVEECLLLQLRVMESTAVNRLAQRIVETYLPDLAAHRFDKVAKAVDATVTEVKDAHEFVKASCYPYPGEQYRSDQDGGRVRPAEIARPDAIVRRTDDGFVIELCRQNAFALRVNAFYDDLRRQMRRASAGYSDESRGHVRDYVNRAKLFIDALQRRNWTFANIVEAIVRTQWEFIERGDAHLKPLTKAMIAAELGVSESTVSRALDGKFVQLPPTGRVVSFDLFFDQSLPTKDRIREIVAAEPRPLTDEEIAVQLTSEGIKIARRTVTKYREEINIPPSTTRGPMAASS*