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13_1_40cm_scaffold_1333

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_1333_1
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..298
DNA (297bp) protein (99aa)
mannose-1-phosphate guanylyltransferase (EC:2.7.7.22); K16011 mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] Tax=RBG_16_Betaproteobacteria_66_20_curated
mannose-1-phosphate guanylyltransferase (GDP) (EC:2.7.7.22)
Mannose-1-phosphate guanylyltransferase (GDP) n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AA37_9PROT
13_1_40cm_scaffold_1333_2
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

305..1735
DNA (1431bp) protein (477aa)
phosphotransferase (EC:5.4.2.-)
phosphoglucomutase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
putative phosphotransferase id=14629449 bin=bin8_Chloro species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
13_1_40cm_scaffold_1333_3

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1728..2174
DNA (447bp) protein (149aa)
Cupin 2 domain-containing protein {ECO:0000313|EMBL:AIE90713.1}; TaxID=1455884 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote AD1000_06_A03.;"
cupin domain-containing protein id=12554070 bin=CNBR_ACIDO species=Myxococcus sp. (contaminant ex DSM 436) genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
cupin
13_1_40cm_scaffold_1333_4
unknown

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2171..2998
DNA (828bp) protein (276aa)

This feature has no annotations

13_1_40cm_scaffold_1333_5
unknown

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3046..3408
DNA (363bp) protein (121aa)

This feature has no annotations

13_1_40cm_scaffold_1333_6
Desulfotomaculum hydrothermale, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3315..4025)
DNA (711bp) protein (237aa)
Putative lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily n=1 Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8EEE6_9FIRM
Putative lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily {ECO:0000313|EMBL:CCO07161.1}; TaxID=1121428 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoco
amino acid/amide ABC transporter ATP-binding protein 2, HAAT family
13_1_40cm_scaffold_1333_7
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4025..4837)
DNA (813bp) protein (271aa)
Phosphonate-transporting ATPase {ECO:0000313|EMBL:EHJ46583.1}; EC=3.6.3.28 {ECO:0000313|EMBL:EHJ46583.1};; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desu
sulfate-transporting ATPase (EC:3.6.3.25)
Phosphonate-transporting ATPase n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7QDS7_9DELT
13_1_40cm_scaffold_1333_8

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comp(4791..5990)
DNA (1200bp) protein (400aa)
Putative ABC-type branched-chain amino acid transport system, permease component n=1 Tax=mine drainage metagenome RepID=E6Q427_9ZZZZ
Putative ABC-type branched-chain amino acid transport system, permease component {ECO:0000313|EMBL:CBI01986.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" sou
ABC-type branched-chain amino acid transport system permease component
13_1_40cm_scaffold_1333_9
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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comp(5996..7042)
DNA (1047bp) protein (349aa)
ABC transporter permease n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4DB5
Branched-chain amino acid ABC-type transport system permease component
Branched-chain amino acid ABC-type transport system permease component {ECO:0000313|EMBL:AHY47094.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; R
13_1_40cm_scaffold_1333_10
unknown

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comp(7124..7297)
DNA (174bp) protein (58aa)

This feature has no annotations

13_1_40cm_scaffold_1333_11
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(7339..8304)
DNA (966bp) protein (322aa)
Extracellular ligand-binding receptor n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TDL2_9CHLR
Extracellular ligand-binding receptor {ECO:0000313|EMBL:EFH88357.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobact
Branched chain amino acid binding protein
13_1_40cm_scaffold_1333_12

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comp(8546..9835)
DNA (1290bp) protein (430aa)
Putative ABC-type branched-chain amino acid transport system, periplasmic component n=1 Tax=mine drainage metagenome RepID=E6Q425_9ZZZZ
Putative ABC-type branched-chain amino acid transport system, periplasmic component {ECO:0000313|EMBL:CBI01984.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;"
periplasmic branched-chain amino acid-binding protein
13_1_40cm_scaffold_1333_13
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

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9927..10802
DNA (876bp) protein (292aa)
TPR repeat-containing protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TIG2_9CHLR
hypothetical protein Tax=RBG_16_Chloroflexi_68_14_curated
hypothetical protein
13_1_40cm_scaffold_1333_14
Heliobacterium modesticaldum, Heliobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11071..12363
DNA (1293bp) protein (431aa)
ATP phosphoribosyltransferase regulatory subunit n=1 Tax=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) RepID=B0TDN5_HELMI
hisS; histidyl-tRNA synthetase
ATP phosphoribosyltransferase regulatory subunit {ECO:0000256|HAMAP-Rule:MF_00125, ECO:0000256|SAAS:SAAS00089029}; TaxID=498761 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Heliobacteriac
13_1_40cm_scaffold_1333_15
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

12360..12998
DNA (639bp) protein (213aa)
hisG; ATP phosphoribosyltransferase (EC:2.4.2.17) Tax=GWC2_Rokubacteria_70_16_curated
ATP phosphoribosyltransferase id=4246280 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hisG; ATP phosphoribosyltransferase
13_1_40cm_scaffold_1333_16
Synechococcus sp. CC9902, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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12988..14259
DNA (1272bp) protein (424aa)
hisD; histidinol dehydrogenase (EC:1.1.1.23)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-R
Histidinol dehydrogenase n=1 Tax=Synechococcus sp. (strain CC9902) RepID=Q3AZA7_SYNS9
13_1_40cm_scaffold_1333_17
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14321..14884
DNA (564bp) protein (188aa)
Imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19); K01693 imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
hisB; imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
Imidazoleglycerol-phosphate dehydratase n=1 Tax=uncultured gamma proteobacterium RepID=H5SD68_9GAMM
13_1_40cm_scaffold_1333_18
Desulfosporosinus orientis, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14937..15530
DNA (594bp) protein (198aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-
imidazole glycerol phosphate synthase n=1 Tax=Paenibacillus ginsengihumi RepID=UPI0003700126
imidazole glycerol phosphate synthase, glutamine amidotransferase subunit
13_1_40cm_scaffold_1333_19
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

15538..16299
DNA (762bp) protein (254aa)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000255|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000255|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000255|HAMAP-Rule:MF_01013}; IGP
imidazole glycerol phosphate synthase n=1 Tax=Geovibrio thiophilus RepID=UPI0003B6E7DD
hisF; Imidazole glycerol phosphate synthase cyclase subunit
13_1_40cm_scaffold_1333_20
Terribacillus aidingensis, Terribacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16296..16598
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Amphibacillus jilinensis RepID=UPI0002FF6361
imidazole glycerol phosphate synthase
Histidine biosynthesis bifunctional protein HisIE {ECO:0000256|HAMAP-Rule:MF_01019, ECO:0000256|SAAS:SAAS00015509}; TaxID=586416 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Terrib
13_1_40cm_scaffold_1333_21
RBG_13_Chloroflexi_53_26_curated, Chloroflexi, Bacteria

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16638..17651
DNA (1014bp) protein (338aa)
dly:Dehly_1121 N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38); K00145 N-acetyl-gamma-glutamyl-phosphate/N-acetyl-gamma-aminoadipyl-phosphate reductase [EC:1.2.1.38 1.2.1.-] id=1242947 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38); K00145 N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] Tax=RBG_13_Chloroflexi_53_26_curated
N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
13_1_40cm_scaffold_1333_22
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

Not on your lists

17642..18763
DNA (1122bp) protein (374aa)
argJ; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase (EC:2.3.1.1 2.3.1.35); K00620 glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] Tax=RBG_16_
Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D505_PELTS
ArgJ; N-acetylglutamate synthase
13_1_40cm_scaffold_1333_23
CSP1_8_Deltaproteobacteria, 43F-1404R, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19190..19540
DNA (351bp) protein (117aa)
acetylglutamate kinase (EC:2.7.2.8); K00930 acetylglutamate kinase [EC:2.7.2.8] Tax=CSP1_8_Deltaproteobacteria
acetylglutamate kinase (EC:2.7.2.8)
acetylglutamate kinase (EC:2.7.2.8); K00930 acetylglutamate kinase [EC:2.7.2.8] id=14624480 bin=bin5_DeltaP species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
13_1_40cm_scaffold_1333_24

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19680..20837
DNA (1158bp) protein (386aa)
hypothetical protein n=1 Tax=Desulfurispora thermophila RepID=UPI00036D29DB
Marine sediment metagenome DNA, contig: S06H3_C01820 {ECO:0000313|EMBL:GAI00470.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
acetylornithine aminotransferase
13_1_40cm_scaffold_1333_25
Salinispora tropica, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20834..21241
DNA (408bp) protein (136aa)
arginine repressor n=1 Tax=Salinispora pacifica RepID=UPI00037B4E12
arginine repressor
Arginine repressor {ECO:0000256|HAMAP-Rule:MF_00173}; TaxID=369723 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora tropica (strain ATCC BAA
13_1_40cm_scaffold_1333_26
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

21231..22478
DNA (1248bp) protein (416aa)
argininosuccinate synthase (EC:6.3.4.5); K01940 argininosuccinate synthase [EC:6.3.4.5] Tax=CG_Dehalo_01
argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TDM0_9CHLR
13_1_40cm_scaffold_1333_27
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

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22625..23818
DNA (1194bp) protein (398aa)
argininosuccinate lyase; K01755 argininosuccinate lyase [EC:4.3.2.1] Tax=RBG_16_Chloroflexi_68_14_curated
argH; argininosuccinate lyase (EC:4.3.2.1)
Argininosuccinate lyase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHS1_9BACT
13_1_40cm_scaffold_1333_28
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

23830..24609
DNA (780bp) protein (260aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-R
pantothenate kinase (EC:2.7.1.33)
Type III pantothenate kinase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HRR0_9FIRM
13_1_40cm_scaffold_1333_29
CG_Arma_02, Armatimonadetes, Bacteria

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24616..26454
DNA (1839bp) protein (613aa)
metal dependent phosphohydrolase Tax=CG_Arma_02
Metal dependent phosphohydrolase id=4426873 bin=GWC2_Methylomirabilis_70_16 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_1_40cm_scaffold_1333_30
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

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26451..27299
DNA (849bp) protein (283aa)
beta-lactamase n=1 Tax=Methylomicrobium buryatense RepID=UPI0003474429
metal-dependent hydrolase, beta-lactamase superfamily I Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
beta-lactamase superfamily metal-dependent hydrolase
Displaying items 1-30 of 36 in total

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