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13_1_40cm_scaffold_216

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_216_1
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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2..2338
DNA (2337bp) protein (779aa)
phosphoenolpyruvate carboxylase (EC:4.1.1.31)
Phosphoenolpyruvate carboxylase {ECO:0000256|HAMAP-Rule:MF_00595, ECO:0000256|SAAS:SAAS00018769}; Short=PEPC {ECO:0000256|HAMAP-Rule:MF_00595};; Short=PEPCase {ECO:0000256|HAMAP-Rule:MF_00595};; EC=4.
Phosphoenolpyruvate carboxylase n=1 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A204_THECD
13_1_40cm_scaffold_216_2
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(2352..2750)
DNA (399bp) protein (133aa)
Glyoxalase-like domain
Glyoxalase-like domain {ECO:0000313|EMBL:AIF82617.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitro
13_1_40cm_scaffold_216_3
Streptomyces lydicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(2782..3393)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Streptomyces sp. HPH0547 RepID=S3B4R8_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJT64499.1}; TaxID=1403539 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces lydicus A02.;"
13_1_40cm_scaffold_216_4
unknown

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comp(3507..3797)
DNA (291bp) protein (97aa)

This feature has no annotations

13_1_40cm_scaffold_216_5
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3822..4880)
DNA (1059bp) protein (353aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX05717.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
hypothetical protein id=14627173 bin=bin7_NC10_sister species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_scaffold_216_6
unknown

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comp(4880..5329)
DNA (450bp) protein (150aa)

This feature has no annotations

13_1_40cm_scaffold_216_7
Amycolatopsis azurea, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5391..8114
DNA (2724bp) protein (908aa)
Uncharacterized protein n=1 Tax=Amycolatopsis azurea DSM 43854 RepID=M2QHW2_9PSEU
LuxR family transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:EMD25517.1}; TaxID=1238180 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis azurea DSM 43854.;
13_1_40cm_scaffold_216_8
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

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comp(8111..8920)
DNA (810bp) protein (270aa)
phosphomethylpyrimidine kinase; K00941 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] Tax=RBG_16_Chloroflexi_68_14_curated
Phosphomethylpyrimidine kinase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C3W4_SPHTD
phosphomethylpyrimidine kinase
13_1_40cm_scaffold_216_9
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(8917..10296)
DNA (1380bp) protein (460aa)
hypothetical protein n=1 Tax=Sulfobacillus thermosulfidooxidans RepID=UPI00036594DF
Permease {ECO:0000313|EMBL:EWM10043.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
cytosine/purines uracil thiamine allantoin permease
13_1_40cm_scaffold_216_10
unknown

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comp(10388..11275)
DNA (888bp) protein (296aa)

This feature has no annotations

13_1_40cm_scaffold_216_11
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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11438..12811
DNA (1374bp) protein (458aa)
glutamate-1-semialdehyde aminotransferase (EC:5.4.3.8)
Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=Frankia sp. CN3 RepID=G6HHP5_9ACTO
Glutamate-1-semialdehyde aminotransferase {ECO:0000313|EMBL:EIV95754.1}; Flags: Precursor;; TaxID=710111 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.
13_1_40cm_scaffold_216_12
unknown

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12832..13116
DNA (285bp) protein (95aa)

This feature has no annotations

13_1_40cm_scaffold_216_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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13113..14081
DNA (969bp) protein (323aa)
PREDICTED: serine racemase-like isoform X3 n=1 Tax=Aplysia californica RepID=UPI0003593F8F
Pyridoxal-5'-phosphate-dependent protein beta subunit
Pyridoxal-5'-phosphate-dependent protein beta subunit {ECO:0000313|EMBL:AHG92280.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_216_14
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14089..15525)
DNA (1437bp) protein (479aa)
6-phosphogluconate dehydrogenase, decarboxylating {ECO:0000256|PIRNR:PIRNR000109}; EC=1.1.1.44 {ECO:0000256|PIRNR:PIRNR000109};; TaxID=469371 species="Bacteria; Actinobacteria; Actinobacteria incertae
6-phosphogluconate dehydrogenase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEEE8
6-phosphogluconate dehydrogenase
13_1_40cm_scaffold_216_15
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15603..17132
DNA (1530bp) protein (510aa)
hypothetical protein n=1 Tax=Streptomyces sp. R1-NS-10 RepID=UPI00037A5C21
Uncharacterized protein {ECO:0000313|EMBL:ETK30687.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024
extracellular solute-binding protein
13_1_40cm_scaffold_216_16
unknown

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comp(17122..17481)
DNA (360bp) protein (120aa)

This feature has no annotations

13_1_40cm_scaffold_216_17
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(17531..17803)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TXN8_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH83085.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racem
hypothetical protein
13_1_40cm_scaffold_216_18
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(17806..18558)
DNA (753bp) protein (251aa)
Oxidoreductase FAD/NAD(P)-binding domain protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C720_SPHTD
oxidoreductase FAD/NAD(P)-binding domain-containing protein
Oxidoreductase FAD/NAD(P)-binding domain protein {ECO:0000313|EMBL:ACZ37781.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteracea
13_1_40cm_scaffold_216_19
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(18528..19133)
DNA (606bp) protein (202aa)
Oxidoreductase molybdopterin binding protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C719_SPHTD
oxidoreductase molybdopterin binding protein
Oxidoreductase molybdopterin binding protein {ECO:0000313|EMBL:ACZ37780.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; S
13_1_40cm_scaffold_216_20
unknown

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comp(19202..19384)
DNA (183bp) protein (61aa)

This feature has no annotations

13_1_40cm_scaffold_216_21
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19469..19669)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8J9F6_ANAD2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL67344.1}; TaxID=455488 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" s
13_1_40cm_scaffold_216_22
unknown

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19730..20311
DNA (582bp) protein (194aa)

This feature has no annotations

13_1_40cm_scaffold_216_23
unknown

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comp(20318..20728)
DNA (411bp) protein (137aa)

This feature has no annotations

Displaying 23 items

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