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13_1_40cm_scaffold_4176

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_4176_1
unknown

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comp(3..749)
DNA (747bp) protein (249aa)

This feature has no annotations

13_1_40cm_scaffold_4176_2
Ralstonia syzygii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(851..1402)
DNA (552bp) protein (184aa)
Putative pilus related protein, TadE-like n=1 Tax=Ralstonia syzygii R24 RepID=G3A512_9RALS
Putative pilus related protein, TadE-like {ECO:0000313|EMBL:CCA89026.1}; TaxID=907261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ral
TadE family protein
13_1_40cm_scaffold_4176_3
unknown

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comp(1399..1671)
DNA (273bp) protein (91aa)

This feature has no annotations

13_1_40cm_scaffold_4176_4
unknown

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1945..2709
DNA (765bp) protein (255aa)

This feature has no annotations

13_1_40cm_scaffold_4176_5
Acetohalobium arabaticum, Acetohalobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

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2715..3659
DNA (945bp) protein (315aa)
Type II secretion system F domain protein n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QTM3_ACEAZ
type II secretion system F domain protein
Type II secretion system F domain protein {ECO:0000313|EMBL:ADL11787.1}; Flags: Precursor;; TaxID=574087 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halobacteroidaceae; Acetohalobium.;
13_1_40cm_scaffold_4176_6
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

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3664..4503
DNA (840bp) protein (280aa)
Type II secretion system protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5USS7_ROSS1
putative bacterial type II secretion system protein
Putative bacterial type II secretion system protein {ECO:0000313|EMBL:BAM01613.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldil
13_1_40cm_scaffold_4176_7
RBG_13_OP11_40_15_curated, Microgenomates, Bacteria

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comp(4588..4944)
DNA (357bp) protein (119aa)
Putative transcriptional regulator n=1 Tax=Thermus oshimai JL-2 RepID=K7QY42_THEOS
MerR family transcriptional regulator; K13640 MerR family transcriptional regulator, heat shock protein HspR Tax=RBG_13_OP11_40_15_curated
putative transcriptional regulator
13_1_40cm_scaffold_4176_8
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

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comp(5142..5531)
DNA (390bp) protein (130aa)
Ribosomal silencing factor RsfS n=1 Tax=Chthonomonas calidirosea T49 RepID=S0ET20_9BACT
iojap-like ribosome-associated protein
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=1303518 species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chth
13_1_40cm_scaffold_4176_9
Ammonifex degensii, Ammonifex, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(5515..6120)
DNA (606bp) protein (202aa)
nicotinate (nicotinamide) nucleotide adenylyltransferase (EC:2.7.7.18)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244};
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9RAT5_AMMDK
13_1_40cm_scaffold_4176_10
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(6117..7331)
DNA (1215bp) protein (405aa)
GTPase Obg n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AT37_9CLOT
GTPase obg; K03979 GTP-binding protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
GTP-binding protein Obg/CgtA
13_1_40cm_scaffold_4176_11
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

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comp(7369..7623)
DNA (255bp) protein (85aa)
50S ribosomal protein L25; K02899 large subunit ribosomal protein L27 id=14632396 bin=bin9_gal15 species=Oceanithermus profundus genus=Oceanithermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=bin9_gal15 organism_group=GAL15
50S ribosomal protein L25; K02899 large subunit ribosomal protein L27 Tax=CSP1_3_Armatimonadetes
rpmA; Probable 50S ribosomal protein L27
13_1_40cm_scaffold_4176_12
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(7628..8134)
DNA (507bp) protein (169aa)
50S ribosomal protein L21 (EC:2.3.1.61)
50S ribosomal protein L21 n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TNN8_9CHLR
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedono
13_1_40cm_scaffold_4176_13
RBG_13_OP3X_46_9_curated, OP3X, Bacteria

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comp(8121..9182)
DNA (1062bp) protein (354aa)
cell elongation-specific peptidoglycan biosynthesis regulator RodA; K05837 rod shape determining protein RodA id=24415236 bin=RBG_19FT_COMBO_GAL15_69_19 species=Anaeromusa acidaminophila genus=Anaeromusa taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
rodA; putative rod shape-determining protein RodA; K05837 rod shape determining protein RodA Tax=RBG_13_OP3X_46_9_curated
rod shape-determining protein RodA
13_1_40cm_scaffold_4176_14
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

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comp(9233..9925)
DNA (693bp) protein (231aa)
Cell division protein ftsi/penicillin-binding protein 2 (Fragment) n=1 Tax=uncultured Chloroflexi bacterium HF0200_09I09 RepID=E0XU65_9CHLR
mrdA; penicillin-binding protein 2; K05515 penicillin-binding protein 2 Tax=RBG_16_Chloroflexi_64_32_curated
putative penicillin-binding protein
13_1_40cm_scaffold_4176_15
unknown

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10131..10397
DNA (267bp) protein (89aa)

This feature has no annotations

13_1_40cm_scaffold_4176_16
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(11051..11548)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L228_THERP
mreD; rod shape-determining protein MreD; K03571 rod shape-determining protein MreD Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein
13_1_40cm_scaffold_4176_17
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(11545..12360)
DNA (816bp) protein (272aa)
Rod shape-determining protein MreC id=14632971 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin9_gal15 organism_group=GAL15
Rod shape-determining protein MreC Tax=CSP1_3_Armatimonadetes
mreC; rod shape-determining protein MreC
13_1_40cm_scaffold_4176_18
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

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comp(12371..13429)
DNA (1059bp) protein (353aa)
rod shape-determining protein MreB; K03569 rod shape-determining protein MreB and related proteins Tax=GWC2_RIF_CHLX_73_18_curated
rod shape-determining protein MreB; K03569 rod shape-determining protein MreB and related proteins id=14628399 bin=bin8_Chloro species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
rod shape-determining protein MreB
13_1_40cm_scaffold_4176_19
unknown

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comp(13528..14337)
DNA (810bp) protein (270aa)

This feature has no annotations

13_1_40cm_scaffold_4176_20
unknown

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comp(14334..15551)
DNA (1218bp) protein (406aa)

This feature has no annotations

13_1_40cm_scaffold_4176_21
unknown

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comp(15541..16080)
DNA (540bp) protein (180aa)

This feature has no annotations

13_1_40cm_scaffold_4176_22
unknown

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comp(16095..16757)
DNA (663bp) protein (221aa)

This feature has no annotations

Displaying 22 items

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