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13_1_40cm_scaffold_469

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_469_1
Ferrimicrobium acidiphilum, Ferrimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

2..1075
DNA (1074bp) protein (358aa)
Extracellular ligand-binding receptor n=1 Tax=Mycobacterium vaccae ATCC 25954 RepID=K0V2K5_MYCVA
Receptor family ligand binding region {ECO:0000313|EMBL:KJE76489.1}; TaxID=1121877 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ferrimicrobium.;" source="Fer
13_1_40cm_scaffold_469_2
Mycobacterium vaccae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1107..1991
DNA (885bp) protein (295aa)
Inner-membrane translocator n=1 Tax=Mycobacterium vaccae ATCC 25954 RepID=K0UJT1_MYCVA
Inner-membrane translocator {ECO:0000313|EMBL:EJZ05245.1}; TaxID=1194972 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium vaccae ATCC 2595
inner-membrane translocator
13_1_40cm_scaffold_469_3
Ferrimicrobium acidiphilum, Ferrimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

1988..2977
DNA (990bp) protein (330aa)
Inner-membrane translocator n=1 Tax=Mycobacterium vaccae ATCC 25954 RepID=K0UEB8_MYCVA
Leucine/isoleucine/valine transporter permease subunit {ECO:0000313|EMBL:KJE76491.1}; TaxID=1121877 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ferrimicrobi
inner-membrane translocator
13_1_40cm_scaffold_469_4
Mycobacterium vaccae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2961..3749
DNA (789bp) protein (263aa)
ABC transporter-like protein n=1 Tax=Mycobacterium vaccae ATCC 25954 RepID=K0UD89_MYCVA
ABC transporter-like protein {ECO:0000313|EMBL:EJZ05247.1}; TaxID=1194972 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium vaccae ATCC 259
ABC transporter-like protein
13_1_40cm_scaffold_469_5
Ferrimicrobium acidiphilum, Ferrimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

3724..4530
DNA (807bp) protein (269aa)
ABC transporter-like protein n=1 Tax=Mycobacterium vaccae ATCC 25954 RepID=K0URK1_MYCVA
High-affinity branched-chain amino acid transport ATP-binding protein LivF {ECO:0000313|EMBL:KJE76494.1}; TaxID=1121877 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrob
ABC transporter
13_1_40cm_scaffold_469_6
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

4527..5450
DNA (924bp) protein (308aa)
5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC:5.3.3.10)
5-carboxymethyl-2-hydroxymuconate Delta-isomerase {ECO:0000313|EMBL:ABQ92287.1}; EC=5.3.3.10 {ECO:0000313|EMBL:ABQ92287.1};; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales;
5-carboxymethyl-2-hydroxymuconate Delta-isomerase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5V084_ROSS1
13_1_40cm_scaffold_469_7
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

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comp(5421..6728)
DNA (1308bp) protein (436aa)
HD domain protein n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KXP0_THERP
HD domain-containing protein
HD domain protein {ECO:0000313|EMBL:ACM05977.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 2750
13_1_40cm_scaffold_469_8
unknown

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comp(6747..6974)
DNA (228bp) protein (76aa)

This feature has no annotations

13_1_40cm_scaffold_469_9
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7264..8085
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2MVW8_9ACTO
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ACU75355.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidip
13_1_40cm_scaffold_469_10
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8082..9356
DNA (1275bp) protein (425aa)
Carbohydrate ABC transporter substrate-binding protein, CUT1 family n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LSB5_ACIC1
extracellular solute-binding protein
Carbohydrate ABC transporter substrate-binding protein, CUT1 family {ECO:0000313|EMBL:ABK52325.1}; Flags: Precursor;; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; A
13_1_40cm_scaffold_469_11
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9385..10353
DNA (969bp) protein (323aa)
Carbohydrate ABC transporter membrane protein 1, CUT1 family n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LSB6_ACIC1
binding-protein-dependent transport system inner membrane protein
Carbohydrate ABC transporter membrane protein 1, CUT1 family {ECO:0000313|EMBL:ABK52326.1}; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Aci
13_1_40cm_scaffold_469_12
Streptomyces griseoaurantiacus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10350..11180
DNA (831bp) protein (277aa)
Sugar binding-protein-dependent transporter n=1 Tax=Streptomyces griseoaurantiacus M045 RepID=F3NMX8_9ACTO
Sugar binding-protein-dependent transporter {ECO:0000313|EMBL:EGG45164.1}; TaxID=996637 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces gri
putative sugar ABC transporter permease protein
13_1_40cm_scaffold_469_13
Streptomyces cattleya, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11183..12631
DNA (1449bp) protein (483aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=1003195 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Strepto
Putative sugar hydrolase n=1 Tax=Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057) RepID=F8K4U1_STREN
sugar hydrolase
13_1_40cm_scaffold_469_14
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12631..13494
DNA (864bp) protein (288aa)
N-acetylmuramic acid 6-phosphate etherase {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795}; Short=MurNAc-6-P etherase {ECO:0000256|HAMAP-Rule:MF_00068};; EC=4.2.1.126 {ECO:0000256|HAMA
N-acetylmuramic acid-6-phosphate etherase n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B2FA69
murQ; N-acetylmuramic acid 6-phosphate etherase
13_1_40cm_scaffold_469_15
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

13491..14612
DNA (1122bp) protein (374aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=926550 species=
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I8P9_CALAS
nagA; N-acetylglucosamine-6-phosphate deacetylase
13_1_40cm_scaffold_469_16
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

14609..15643
DNA (1035bp) protein (345aa)
glutamine--fructose-6-phosphate transaminase (isomerizing) (EC:2.6.1.16)
Glutamine--fructose-6-phosphate transaminase (Isomerizing) {ECO:0000313|EMBL:ACZ39491.1}; EC=2.6.1.16 {ECO:0000313|EMBL:ACZ39491.1};; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sp
Glutamine--fructose-6-phosphate transaminase (Isomerizing) n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C5T9_SPHTD
13_1_40cm_scaffold_469_17
Nocardia brasiliensis, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15640..16098
DNA (459bp) protein (153aa)
BadF/BadG/BcrA/BcrD type ATPase n=1 Tax=Nocardia brasiliensis ATCC 700358 RepID=K0F253_9NOCA
Uncharacterized protein {ECO:0000313|EMBL:GAJ83092.1}; TaxID=1206724 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia brasiliensis NBRC 14402.;"
BadF/BadG/BcrA/BcrD type ATPase
Displaying 17 items

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