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13_1_40cm_scaffold_5138

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_5138_1

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3..158
DNA (156bp) protein (52aa)
bcd3; butyryl-CoA dehydrogenase (EC:1.3.99.2)
acyl-CoA dehydrogenase n=1 Tax=Sporichthya polymorpha RepID=UPI0003645597
Uncharacterized protein {ECO:0000313|EMBL:KGA17377.1}; TaxID=449393 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="freshwater metagenome.;"
13_1_40cm_scaffold_5138_2
Nocardia nova, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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281..529
DNA (249bp) protein (83aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHH22014.1}; TaxID=1415166 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia nova SH22a.;"
13_1_40cm_scaffold_5138_3
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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533..1192
DNA (660bp) protein (220aa)
hypothetical protein Tax=RifOxyA12_full_Proteobacteria_58_15_curated
13_1_40cm_scaffold_5138_4
unknown

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comp(1120..1350)
DNA (231bp) protein (77aa)

This feature has no annotations

13_1_40cm_scaffold_5138_5
Gordonia terrae, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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1382..1714
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Gordonia terrae C-6 RepID=R7Y784_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EON31860.1}; TaxID=1316928 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia terrae C-6.;"
13_1_40cm_scaffold_5138_6
GWF2_OD1_39_8, Falkowbacteria, Parcubacteria, Bacteria

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1772..3220
DNA (1449bp) protein (483aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR33351.1}; TaxID=1618642 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Falkowbacteria) bacterium GW2011_GWF2_39_8.;"
cell envelope-related transcriptional attenuator
hypothetical protein id=5801533 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
13_1_40cm_scaffold_5138_7
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(3474..3815)
DNA (342bp) protein (114aa)
Tax=RBG_16_Actinobacteria_68_12_curated
13_1_40cm_scaffold_5138_8
unknown

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3968..4102
DNA (135bp) protein (45aa)

This feature has no annotations

13_1_40cm_scaffold_5138_9

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4118..5761
DNA (1644bp) protein (548aa)
methylmalonyl-CoA mutase large subunit (EC:5.4.99.2)
methylmalonyl-CoA mutase n=1 Tax=Desulfurispora thermophila RepID=UPI0003649C1D
Uncharacterized protein {ECO:0000313|EMBL:CBH74908.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
13_1_40cm_scaffold_5138_10
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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5761..6180
DNA (420bp) protein (140aa)
Cobalamin B12-binding domain protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HBU6_ANADF
cobalamin B12-binding domain-containing protein
Cobalamin B12-binding domain protein {ECO:0000313|EMBL:ABS26192.1}; Flags: Precursor;; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxoba
13_1_40cm_scaffold_5138_11
RBG_16_OP11_43_9_curated, Microgenomates, Bacteria

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comp(6200..6712)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Gordonia malaquae NBRC 108250 RepID=M3VBB4_9ACTO
hypothetical protein Tax=RBG_16_OP11_43_9_curated
RDD domain-containing protein
13_1_40cm_scaffold_5138_12
unknown

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comp(6760..7194)
DNA (435bp) protein (145aa)

This feature has no annotations

13_1_40cm_scaffold_5138_13
RIFOXYD1_FULL_OP11_Daviesbacteria_41_10_curated, Daviesbacteria, Microgenomates, Bacteria

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7361..8041
DNA (681bp) protein (227aa)
50S ribosomal protein L25 n=1 Tax=uncultured bacterium RepID=K2B7X4_9BACT
ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5; K02897 large subunit ribosomal protein L25 Tax=RIFOXYD1_FULL_OP11_Daviesbacteria_41_10_curated
50S ribosomal protein L25
13_1_40cm_scaffold_5138_14
Criblamydia sequanensis, Criblamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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8038..8592
DNA (555bp) protein (185aa)
Putative mechanosensitive ion channel n=1 Tax=Waddlia chondrophila (strain ATCC VR-1470 / WSU 86-1044) RepID=D6YWC1_WADCW
Mechanosensitive ion channel protein {ECO:0000313|EMBL:CDR34999.1}; TaxID=340071 species="Bacteria; Chlamydiae; Chlamydiales; Criblamydiaceae; Criblamydia.;" source="Criblamydia sequanensis.;"
mechanosensitive ion channel
13_1_40cm_scaffold_5138_15
Parasitella parasitica, Parasitella, Mucorales, Fungi

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comp(8570..9190)
DNA (621bp) protein (207aa)
Nucleoside diphosphate kinase n=1 Tax=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) RepID=I1CD27_RHIO9
Uncharacterized protein {ECO:0000313|EMBL:CEP11142.1}; TaxID=35722 species="Eukaryota; Fungi; Fungi incertae sedis; Early diverging fungal lineages; Mucoromycotina; Mucorales; Mucorineae; Mucoraceae;
nucleoside-diphosphate kinase
13_1_40cm_scaffold_5138_16
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(9204..10040)
DNA (837bp) protein (279aa)
Replication-associated recombination protein A n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EKS8_9CHLR
AAA ATPase; K07478 putative ATPase Tax=RBG_16_Chloroflexi_68_14_curated
AAA ATPase
13_1_40cm_scaffold_5138_17
R_Deltaproteobacteria_38_15, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10466..11068
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. AKL7 RepID=UPI0003631FD4
diguanylate cyclase domain-containing protein Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_38_15_curated
diguanylate cyclase
13_1_40cm_scaffold_5138_18
Thermobaculum terrenum, Thermobaculum, Bacteria

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11093..11728
DNA (636bp) protein (212aa)
Phosphoglycerate mutase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CEB0_THET1
phosphoglycerate mutase
Phosphoglycerate mutase {ECO:0000313|EMBL:ACZ41266.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
13_1_40cm_scaffold_5138_19
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

11725..12954
DNA (1230bp) protein (410aa)
glycosidase (EC:3.2.1.-); K05350 beta-glucosidase [EC:3.2.1.21] id=24521880 bin=RBG_19FT_COMBO_GAL15_69_19 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
glycoside hydrolase family protein; K05350 beta-glucosidase [EC:3.2.1.21] Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
putative glycoside hydrolase
13_1_40cm_scaffold_5138_20
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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13028..13486
DNA (459bp) protein (153aa)
Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2TVU5_9DELT
hypothetical protein; K02199 cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
dsbE; thiol:disulfide interchange protein DsbE
13_1_40cm_scaffold_5138_21
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

13483..13863
DNA (381bp) protein (127aa)
CcmE/CycJ protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TNF4_9CHLR
CcmE/CycJ protein {ECO:0000313|EMBL:EFH87285.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedon
cytochrome C biogenesis protein CcmE
13_1_40cm_scaffold_5138_22
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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14033..14371
DNA (339bp) protein (113aa)
Cytochrome c assembly protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C3N3_SPHTD
Cytochrome C biogenesis protein {ECO:0000313|EMBL:ETX00140.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TS
cytochrome c assembly protein
Displaying 22 items

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