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13_1_40cm_scaffold_674

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_674_1
Nocardiopsis alba, Nocardiopsis, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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1..990
DNA (990bp) protein (330aa)
AMP-binding enzyme family protein n=1 Tax=Nocardiopsis alba (strain ATCC BAA-2165 / BE74) RepID=J7L1W6_NOCAA
AMP-binding enzyme family protein
AMP-binding enzyme family protein {ECO:0000313|EMBL:AFR06751.1}; TaxID=1205910 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocardiopsis alba (strai
13_1_40cm_scaffold_674_2
Thermus filiformis, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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1377..2906
DNA (1530bp) protein (510aa)
hypothetical protein n=1 Tax=Thermus oshimai RepID=UPI00037ED189
4-hydroxybenzoate--CoA ligase {ECO:0000313|EMBL:KGQ21102.1}; TaxID=276 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus filiformis.;"
benzoate-CoA ligase family
13_1_40cm_scaffold_674_3
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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2899..3930
DNA (1032bp) protein (344aa)
Isocitrate/isopropylmalate dehydrogenase n=1 Tax=Actinoplanes sp. N902-109 RepID=R4LKW9_9ACTO
leuB; isocitrate/isopropylmalate dehydrogenase
Isocitrate/isopropylmalate dehydrogenase {ECO:0000313|EMBL:AGL19073.1}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp.
13_1_40cm_scaffold_674_4
Desulfotomaculum hydrothermale, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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3935..5224
DNA (1290bp) protein (430aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01027}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01027};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; Isopropylmalate is
3-isopropylmalate dehydratase large subunit n=1 Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8DYK4_9FIRM
3-isopropylmalate dehydratase large subunit
13_1_40cm_scaffold_674_5
unknown

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5221..5997
DNA (777bp) protein (259aa)

This feature has no annotations

13_1_40cm_scaffold_674_6
Pyrococcus abyssi, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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5994..6530
DNA (537bp) protein (179aa)
leuD; 3-isopropylmalate dehydratase small subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase small subunit 1; EC=4.2.1.33;; Alpha-IPM isomerase 1; Short=IPMI 1;; Isopropylmalate isomerase 1; TaxID=272844 species="Archaea; Euryarchaeota; Thermococci; Thermococcale
3-isopropylmalate dehydratase small subunit 1 n=1 Tax=Pyrococcus abyssi (strain GE5 / Orsay) RepID=LEUD1_PYRAB
13_1_40cm_scaffold_674_7
Desulfosporosinus sp. I2, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6530..7912
DNA (1383bp) protein (461aa)
Putative Isopropylmalate/citramalate/homocitrate synthase n=1 Tax=mine drainage metagenome RepID=E6Q4U0_9ZZZZ
2-isopropylmalate synthase {ECO:0000313|EMBL:KJR44661.1}; TaxID=1617025 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. I2.
aksA; trans-homoaconitate synthase
13_1_40cm_scaffold_674_8
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

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7912..8898
DNA (987bp) protein (329aa)
3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) (EC:1.2.4.4); K00166 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [EC:1.2.4.4] Tax=GWC2_RIF_CHLX_73_18_curated
3-methyl-2-oxobutanoate dehydrogenase (EC:1.2.4.4)
3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) id=4899347 bin=GWC2_Chloroflexi_73_18 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
13_1_40cm_scaffold_674_9
Leishmania mexicana, Leishmania, Kinetoplastida, Eukaryota

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8977..10872
DNA (1896bp) protein (632aa)
PREDICTED: uncharacterized protein LOC100829785 n=1 Tax=Brachypodium distachyon RepID=UPI000234DD52
Putative uncharacterized protein {ECO:0000313|EMBL:CBZ30587.1}; TaxID=929439 species="Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania.;" source="Leishmania mexicana
hypothetical protein
13_1_40cm_scaffold_674_10
unknown

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comp(10877..11077)
DNA (201bp) protein (67aa)

This feature has no annotations

13_1_40cm_scaffold_674_11
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(11088..11336)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EK03_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CCF85015.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source
hypothetical protein
13_1_40cm_scaffold_674_12
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(11470..12207)
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EK04_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CCF85016.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source
hypothetical protein
13_1_40cm_scaffold_674_13
RBG_16_Gammaproteobacteria_66_13_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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12296..13510
DNA (1215bp) protein (405aa)
hypothetical protein n=1 Tax=Armatimonadetes bacterium JGI 0000077-K19 RepID=UPI0003B58630
major facilitator superfamily protein Tax=RBG_16_Gammaproteobacteria_66_13_curated
mdtG; major facilitator superfamily protein
13_1_40cm_scaffold_674_14
RBG_13_Actinobacteria_55_18_curated, Actinobacteria, Bacteria

Not on your lists

13507..14130
DNA (624bp) protein (208aa)
Phosphodiesterase family protein n=1 Tax=Aneurinibacillus aneurinilyticus ATCC 12856 RepID=U1YEW7_ANEAE
phosphodiesterase; K07095 Tax=RBG_13_Actinobacteria_55_18_curated
phosphodiesterase, MJ0936 family
13_1_40cm_scaffold_674_15
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

14141..15103
DNA (963bp) protein (321aa)
GCN5-related N-acetyltransferase n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SKG9_9BACT
N-acetyltransferase GCN5 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
N-acetyltransferase GCN5
13_1_40cm_scaffold_674_16
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

15108..15218
DNA (111bp) protein (37aa)
Heat shock protein DnaJ domain protein n=1 Tax=Desulfovibrio alkalitolerans DSM 16529 RepID=S7UR87_9DELT
molecular chaperone DnaJ; K05516 curved DNA-binding protein Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
chaperone DnaJ domain-containing protein
Displaying 16 items

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