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13_1_40cm_scaffold_7382

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_7382_1
RHI_OD1_Magasanikbacteria_41_16, Magasanikbacteria, Parcubacteria, Bacteria

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1..567
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-133-G06 RepID=UPI000364EA96
chromosome segregation protein ScpA
chromosome segregation and condensation protein ScpA; K05896 segregation and condensation protein A Tax=RIFCSPHIGHO2_12_FULL_OD1_Magasanikbacteria_41_16_curated
13_1_40cm_scaffold_7382_2
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

564..1070
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Orenia marismortui RepID=UPI000371EC1F
chromosome segregation and condensation protein ScpB; K06024 segregation and condensation protein B Tax=CG_Anaero_02
chromosome segregation and condensation protein ScpB
13_1_40cm_scaffold_7382_3
BJP_IG2102_Coriobacteriales_64_17, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

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1071..1820
DNA (750bp) protein (250aa)
Pseudouridine synthase n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GDY1_9FIRM
pseudouridine synthase
Tax=BJP_IG2102_Coriobacteriales_64_17
13_1_40cm_scaffold_7382_4
Synechococcus sp. JA-3-3Ab, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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1817..2470
DNA (654bp) protein (218aa)
panC_cmk; bifunctional pantoate ligase/cytidylate kinase (EC:2.7.4.14 6.3.2.1)
Bifunctional pantoate ligase/cytidylate kinase; Includes:; Pantoate--beta-alanine ligase; EC=6.3.2.1;; Pantoate-activating enzyme; Pantothenate synthetase; Includes:; Cytidylate kinase; Short=CK;; EC=
Bifunctional pantoate ligase/cytidylate kinase n=1 Tax=Synechococcus sp. (strain JA-3-3Ab) RepID=PANCY_SYNJA
13_1_40cm_scaffold_7382_5
unknown

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comp(2562..2687)
DNA (126bp) protein (42aa)

This feature has no annotations

13_1_40cm_scaffold_7382_6
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

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comp(3255..4565)
DNA (1311bp) protein (437aa)
Uncharacterized protein n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KXN2_THERP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM05453.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATC
13_1_40cm_scaffold_7382_7
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4647..7358
DNA (2712bp) protein (904aa)
ATP-dependent DNA helicase n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67NP5_SYMTH
ATP-dependent DNA helicase
ATP-dependent DNA helicase {ECO:0000313|EMBL:BAD40698.1}; TaxID=292459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacterium thermoph
13_1_40cm_scaffold_7382_8
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

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7426..8088
DNA (663bp) protein (221aa)
uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] Tax=RBG_16_Chloroflexi_64_32_curated
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z2Y3_DESAT
Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase
13_1_40cm_scaffold_7382_9
Chloroflexus aggregans, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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8116..8814
DNA (699bp) protein (233aa)
Methionine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00098}; EC=6.1.1.10 {ECO:0000255|HAMAP-Rule:MF_00098};; Methionyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00098}; Short=MetRS {ECO:0000255|HAMAP-R
Methionine--tRNA ligase n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=SYM_CHLAD
Suspect SCG annotation. See neighboring gene [13_1_40cm_scaffold_7382_10].
methionyl-tRNA synthetase
13_1_40cm_scaffold_7382_10
Chloroflexus aurantiacus, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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8814..9698
DNA (885bp) protein (295aa)
Methionine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00098}; EC=6.1.1.10 {ECO:0000255|HAMAP-Rule:MF_00098};; Methionyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00098}; Short=MetRS {ECO:0000255|HAMAP-R
Methionine--tRNA ligase n=2 Tax=Chloroflexus RepID=SYM_CHLAA
methionyl-tRNA synthetase
13_1_40cm_scaffold_7382_11
BJP_IG2157_Desulfuromonadales_56_134, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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9713..10438
DNA (726bp) protein (242aa)
TatD-related deoxyribonuclease n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXH3_DESAC
TatD family hydrolase
Tax=BJP_IG2157_Desulfuromonadales_56_134
13_1_40cm_scaffold_7382_12
GWB2_Chloroflexi_54_36_curated, Chloroflexi, Bacteria

Not on your lists


10435..11280
DNA (846bp) protein (282aa)
ksgA; dimethyladenosine transferase (EC:2.1.1.-); K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] Tax=GWB2_Chloroflexi_54_36_curated
ksgA; dimethyladenosine transferase (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase A id=1801699 bin=GWB2_Chloroflexi_54_36 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
13_1_40cm_scaffold_7382_13
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

11293..12606
DNA (1314bp) protein (438aa)
major facilitator superfamily protein Tax=RBG_16_RIF_CHLX_69_14_curated
major facilitator superfamily protein id=14628854 bin=bin8_Chloro species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
major facilitator family transporter
13_1_40cm_scaffold_7382_14
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12566..13153)
DNA (588bp) protein (196aa)
Phosphoesterase, PA-phosphatase related n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZG8_RUBXD
PA-phosphatase-like phosphoesterase
Phosphoesterase, PA-phosphatase related {ECO:0000313|EMBL:ABG03210.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;
13_1_40cm_scaffold_7382_15
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

13178..14242
DNA (1065bp) protein (355aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:000
Threonine--tRNA ligase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CDN7_THET1
threonyl-tRNA synthetase
13_1_40cm_scaffold_7382_16
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

14226..14882
DNA (657bp) protein (219aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:000
Threonine--tRNA ligase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CDN7_THET1
threonyl-tRNA synthetase
Displaying 16 items

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