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13_1_40cm_scaffold_17593

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_17593_1
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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2..787
DNA (786bp) protein (262aa)
hydroxymethylbutenyl pyrophosphate reductase; K02945 small subunit ribosomal protein S1; K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [EC:1.17.1.2] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_
4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2); K02945 small subunit ribosomal protein S1; K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [EC:1.17.1.2] id=14628907 bin=bin8_Chloro species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
hydroxymethylbutenyl pyrophosphate reductase
13_1_40cm_scaffold_17593_2
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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798..2114
DNA (1317bp) protein (439aa)
GTPase Der n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CCZ9_THET1
small GTP-binding protein; K03977 GTP-binding protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
small GTP-binding protein
13_1_40cm_scaffold_17593_3
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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2111..2755
DNA (645bp) protein (215aa)
membrane protein; K08591 glycerol-3-phosphate acyltransferase PlsY [EC:2.3.1.15] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Glycerol-3-phosphate acyltransferase n=1 Tax=Rubidibacter lacunae KORDI 51-2 RepID=U5DF29_9CHRO
acyl-phosphate glycerol-3-phosphate acyltransferase
13_1_40cm_scaffold_17593_4
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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2752..3828
DNA (1077bp) protein (359aa)
glycerol-3-phosphate dehydrogenase (NAD(P)(+)); K00057 glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
glycerol-3-phosphate dehydrogenase (NAD(P)(+)); K00057 glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] id=14628905 bin=bin8_Chloro species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
gpsA; protein GpsA
13_1_40cm_scaffold_17593_5
unknown

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comp(3890..4381)
DNA (492bp) protein (164aa)

This feature has no annotations

13_1_40cm_scaffold_17593_6
unknown

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4566..5249
DNA (684bp) protein (228aa)

This feature has no annotations

13_1_40cm_scaffold_17593_7
Mycobacterium gilvum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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5293..5730
DNA (438bp) protein (146aa)
Superoxide dismutase, Ni {ECO:0000313|EMBL:ADU01582.1}; EC=1.15.1.1 {ECO:0000313|EMBL:ADU01582.1};; TaxID=278137 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;
superoxide dismutase n=1 Tax=Streptomyces sp. ATexAB-D23 RepID=UPI0003624799
superoxide dismutase
13_1_40cm_scaffold_17593_8
GWA1_OD1_53_13_partial, Parcubacteria, Bacteria

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5767..6042
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=Actinopolyspora mortivallis RepID=UPI00037C7A00
Signal peptidase {ECO:0000313|EMBL:KKW33304.1}; TaxID=1618800 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_53_13.;"
nickel-type superoxide dismutase maturation protease
13_1_40cm_scaffold_17593_9
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

6128..6409
DNA (282bp) protein (94aa)
Fe-S cluster protector protein n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EU98_9BACT
Fe-S cluster protector protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Fe-S cluster protector protein
13_1_40cm_scaffold_17593_10
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

6409..7218
DNA (810bp) protein (270aa)
Gas vesicle synthesis GvpLGvpF n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INZ8_KORVE
gas vesicle synthesis GvpLGvpF Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Gas vesicle synthesis GvpLGvpF
13_1_40cm_scaffold_17593_11
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

7225..7551
DNA (327bp) protein (109aa)
Gas vesicle protein n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9Y8A5_HALP7
Gas vesicle G Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
gas vesicle G
13_1_40cm_scaffold_17593_12
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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7548..8348
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Streptomyces aurantiacus JA 4570 RepID=S3ZES8_9ACTO
gas vesicle synthesis protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
gas vesicle synthesis protein
13_1_40cm_scaffold_17593_13
RBG_13_Planctomycetes_60_9_curated, Phycisphaerae, Planctomycetes, Bacteria

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8345..8551
DNA (207bp) protein (69aa)
hypothetical protein n=1 Tax=Cloacimonetes bacterium SCGC AAA252-N05 RepID=UPI000372D8E5
hypothetical protein Tax=RBG_13_Planctomycetes_60_9_curated
gas vesicle protein GvpA
13_1_40cm_scaffold_17593_14
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8548..9237
DNA (690bp) protein (230aa)
Gas vesicle synthesis protein n=3 Tax=Amycolatopsis mediterranei RepID=D8HJQ0_AMYMU
gas vesicle synthesis protein
Gas vesicle synthesis protein {ECO:0000313|EMBL:AEK47327.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei
13_1_40cm_scaffold_17593_15
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

9473..9793
DNA (321bp) protein (107aa)
Gas vesicle structural protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INZ4_KORVE
gas vesicle protein GVPa Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
gas vesicle protein GVPa
13_1_40cm_scaffold_17593_16
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9800..9955
DNA (156bp) protein (52aa)
Gas vesicle structural protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=GVPA_KORVE
Gas vesicle structural protein (GVP) {ECO:0000313|EMBL:AKF10197.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" so
Gas vesicle structural protein
Displaying 16 items

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