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13_1_40cm_scaffold_2058

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_2058_1
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

2..550
DNA (549bp) protein (183aa)
putative prenyltransferase; K02548 1,4-dihydroxy-2-naphthoate octaprenyltransferase [EC:2.5.1.74 2.5.1.-] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Putative prenyltransferase n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N008_ANATU
putative prenyltransferase
13_1_40cm_scaffold_2058_2
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

comp(640..1965)
DNA (1326bp) protein (442aa)
glycosyl hydrolase id=14629295 bin=bin8_Chloro species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=bin8_Chloro organism_group=Chloroflexi
glycosyl hydrolase Tax=CSP1_4_Chloroflexi
13_1_40cm_scaffold_2058_3
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

2178..2480
DNA (303bp) protein (101aa)
Rieske (2Fe-2S) domain-containing protein id=14630030 bin=bin8_Chloro species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
Rieske (2Fe-2S) domain-containing protein Tax=CSP1_4_Chloroflexi
Rieske (2Fe-2S) domain-containing protein
13_1_40cm_scaffold_2058_4
Saccharopolyspora rectivirgula, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2492..3400)
DNA (909bp) protein (303aa)
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI000371555C
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=28042 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopoly
DNA repair protein
13_1_40cm_scaffold_2058_5
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

comp(3447..4544)
DNA (1098bp) protein (366aa)
integral membrane sensor signal transduction histidine kinase (EC:2.7.13.3); K07642 two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] id=14630091 bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
integral membrane sensor signal transduction histidine kinase (EC:2.7.13.3); K07642 two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] Tax=CSP1_4_Chloroflexi
integral membrane sensor signal transduction histidine kinase
13_1_40cm_scaffold_2058_6
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

comp(4541..5206)
DNA (666bp) protein (222aa)
winged helix family two component transcriptional regulator Tax=CSP1_4_Chloroflexi
winged helix family two component transcriptional regulator id=14630092 bin=bin8_Chloro species=Oscillochloris trichoides genus=Oscillochloris taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
CheY-like receiver domain/winged-helix DNA-binding domain-containing response regulator
13_1_40cm_scaffold_2058_7
R_OD1_Yanofskybacteria_49_25, Yanofskybacteria, Parcubacteria, Bacteria

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5614..6120
DNA (507bp) protein (169aa)
Secreted protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XX40_9ACTO
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_49_25_curated
hypothetical protein
13_1_40cm_scaffold_2058_8
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6149..6655)
DNA (507bp) protein (169aa)
AhpC/TSA family
AhpC/TSA family {ECO:0000313|EMBL:AHY47933.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter rad
13_1_40cm_scaffold_2058_9
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6902..7168)
DNA (267bp) protein (89aa)
Phosphate binding protein {ECO:0000313|EMBL:EEG31138.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentos
13_1_40cm_scaffold_2058_10
unknown

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7484..7774
DNA (291bp) protein (97aa)

This feature has no annotations

13_1_40cm_scaffold_2058_11
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

8007..9518
DNA (1512bp) protein (504aa)
aldehyde Dehydrogenase; K00128 aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Aldehyde Dehydrogenase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C1X5_SPHTD
aldehyde Dehydrogenase
13_1_40cm_scaffold_2058_12
RBG_13_Bathyarchaeota_52_12_curated, Bathyarchaeota, Archaea

Not on your lists

comp(9536..10258)
DNA (723bp) protein (241aa)
Uncharacterized protein (Fragment) n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VWA2_9EURY
hypothetical protein Tax=RBG_13_Bathyarchaeota_52_12_curated
hypothetical protein
13_1_40cm_scaffold_2058_13
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

Not on your lists

comp(10271..10540)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2BC49_STRRD
hypothetical protein Tax=RBG_13_Chloroflexi_68_17_curated
hypothetical protein
13_1_40cm_scaffold_2058_14
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(10537..11649)
DNA (1113bp) protein (371aa)
histidine kinase (EC:2.7.13.3); K02484 two-component system, OmpR family, sensor kinase [EC:2.7.13.3] Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
histidine kinase (EC:2.7.13.3); K02484 two-component system, OmpR family, sensor kinase [EC:2.7.13.3] id=1247318 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
histidine kinase (EC:2.7.13.3)
13_1_40cm_scaffold_2058_15
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(11646..12332)
DNA (687bp) protein (229aa)
Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SQV1_9BACT id=1247317 bin=RBG9 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG9 organism_group=Chloroflexi
winged helix family two component transcriptional regulator Tax=RBG_16_RIF_CHLX_69_14_curated
winged helix family two component transcriptional regulator
13_1_40cm_scaffold_2058_16
unknown

Not on your lists

comp(12400..12762)
DNA (363bp) protein (121aa)

This feature has no annotations

13_1_40cm_scaffold_2058_17
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(12847..13395)
DNA (549bp) protein (183aa)
hypothetical protein; K07020 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Alpha/beta hydrolase superfamily enzyme, predicted hydrolase id=4413390 bin=GWC2_Chloroflexi_73_18 species=Rhodococcus triatomae genus=Rhodococcus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
alpha/beta hydrolase
13_1_40cm_scaffold_2058_18
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(13392..15782)
DNA (2391bp) protein (797aa)
ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
ATP-dependent DNA ligase n=1 Tax=Patulibacter medicamentivorans RepID=H0E537_9ACTN
ATP-dependent DNA ligase
13_1_40cm_scaffold_2058_19
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

15818..17449
DNA (1632bp) protein (544aa)
hypothetical protein n=1 Tax=Actinoalloteichus spitiensis RepID=UPI00036FA6C8
lipoprotein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein
13_1_40cm_scaffold_2058_20
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17453..17875
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00036E28AC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB44409.1}; TaxID=263358 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-
13_1_40cm_scaffold_2058_21
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17963..18802
DNA (840bp) protein (280aa)
Probable DNA repair protein Dred_2003 id=4413391 bin=GWC2_Chloroflexi_73_18 species=Desulfotomaculum reducens genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora
Ku protein
13_1_40cm_scaffold_2058_22
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

18852..20117
DNA (1266bp) protein (422aa)
DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1] Tax=CSP1_4_Chloroflexi
hypothetical protein n=1 Tax=Longispora albida RepID=UPI0003667EC8
putative DNA ligase
13_1_40cm_scaffold_2058_23
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

20080..21582
DNA (1503bp) protein (501aa)
pyrG; CTP synthetase (EC:6.3.4.2); K01937 CTP synthase [EC:6.3.4.2] id=14628780 bin=bin8_Chloro species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
pyrG; CTP synthetase (EC:6.3.4.2); K01937 CTP synthase [EC:6.3.4.2] Tax=CSP1_4_Chloroflexi
CTP synthase (EC:6.3.4.2)
13_1_40cm_scaffold_2058_24
Fervidobacterium pennivorans, Fervidobacterium, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

21579..21728
DNA (150bp) protein (50aa)
Probable transaldolase {ECO:0000256|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00494};; TaxID=771875 species="Bacteria; Thermotogae; Thermotogales; Fervidobacteriaceae; Fervidobacteri
Probable transaldolase n=1 Tax=Fervidobacterium pennivorans (strain DSM 9078 / Ven5) RepID=H9UEJ5_FERPD
fructose-6-phosphate aldolase, TalC/MipB family
Displaying 24 items

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