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13_1_40cm_scaffold_26612

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_26612_1
Nesterenkonia sp. AN1, Nesterenkonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3..218)
DNA (216bp) protein (72aa)
AraC family transcriptional regulator {ECO:0000313|EMBL:EXF24152.1}; TaxID=652017 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Nesterenkonia.;" source="Nesterenkonia sp. AN1.;"
13_1_40cm_scaffold_26612_2
Thermus filiformis, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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comp(215..709)
DNA (495bp) protein (165aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01032}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01032};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; Isopropylmalate is
3-isopropylmalate dehydratase small subunit n=1 Tax=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) RepID=Q5SH20_THET8
homoaconitate hydratase small subunit
13_1_40cm_scaffold_26612_3
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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comp(709..2076)
DNA (1368bp) protein (456aa)
hacA; homoaconitase, large subunit (EC:4.2.1.36); K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hacA; homoaconitase, large subunit (EC:4.2.1.36)
UPI00039E007D related cluster n=1 Tax=unknown RepID=UPI00039E007D
13_1_40cm_scaffold_26612_4
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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comp(2069..3199)
DNA (1131bp) protein (377aa)
putative 2-isopropylmalate synthase; K01655 homocitrate synthase [EC:2.3.3.14] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Putative 2-isopropylmalate synthase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0HZS9_CALAS
putative 2-isopropylmalate synthase
13_1_40cm_scaffold_26612_5
unknown

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4015..5043
DNA (1029bp) protein (343aa)

This feature has no annotations

13_1_40cm_scaffold_26612_6
Desulfovibrio vulgaris, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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5131..5712
DNA (582bp) protein (194aa)
Two component transcriptional regulator, winged helix family n=3 Tax=Desulfovibrio vulgaris RepID=A1VER1_DESVV
two component transcriptional regulator
Phosphate regulon transcriptional regulator PhoB {ECO:0000313|EMBL:AAS95563.1}; TaxID=882 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio
13_1_40cm_scaffold_26612_7
unknown

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5712..5930
DNA (219bp) protein (73aa)

This feature has no annotations

13_1_40cm_scaffold_26612_8
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

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5947..6987
DNA (1041bp) protein (347aa)
phosphofructokinase, pyrophosphate dependent (EC:2.7.1.11); K00850 6-phosphofructokinase [EC:2.7.1.11] id=14632724 bin=bin9_gal15 species=Methanospirillum hungatei genus=Methanospirillum taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=bin9_gal15 organism_group=GAL15
phosphofructokinase, pyrophosphate dependent (EC:2.7.1.11); K00850 6-phosphofructokinase [EC:2.7.1.11] Tax=CSP1_3_Armatimonadetes
pyrophosphate-dependent phosphofructokinase (EC:2.7.1.90)
13_1_40cm_scaffold_26612_9
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7104..7895
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07UV2_RHOP5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ04282.1}; Flags: Precursor;; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" sourc
13_1_40cm_scaffold_26612_10
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

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7939..8430
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I447_CALAS
hypothetical protein Tax=RBG_16_RIF_CHLX_70_13_curated
hypothetical protein
13_1_40cm_scaffold_26612_11
Methanoplanus limicola, Methanoplanus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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comp(8427..9035)
DNA (609bp) protein (203aa)
PEGA domain protein n=1 Tax=Methanoplanus limicola DSM 2279 RepID=H1YYR3_9EURY
PEGA domain protein {ECO:0000313|EMBL:EHQ36046.1}; Flags: Precursor;; TaxID=937775 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoplanus.;" source="M
hypothetical protein
13_1_40cm_scaffold_26612_12
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(9299..11974)
DNA (2676bp) protein (892aa)
Glycosyl hydrolase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q022A7_SOLUE
glycosyl hydrolase
Glycosyl hydrolase {ECO:0000313|EMBL:ABJ84196.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Soli
Displaying 12 items

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