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13_1_40cm_scaffold_2862

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_2862_1
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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2..1453
DNA (1452bp) protein (484aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B5L2_HERA2
RND family efflux transporter MFP subunit Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
RND family efflux transporter MFP subunit
13_1_40cm_scaffold_2862_2
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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1450..2190
DNA (741bp) protein (247aa)
ABC transporter ATP-binding protein; K09810 lipoprotein-releasing system ATP-binding protein [EC:3.6.3.-] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
ABC-type antimicrobial peptide transport system, ATPase component n=1 Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5Y039_9FIRM
ABC-type antimicrobial peptide transport system,ATPase component
13_1_40cm_scaffold_2862_3
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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2187..3455
DNA (1269bp) protein (423aa)
antimicrobial peptide ABC transporter permease Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein id=5094324 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
multidrug ABC transporter substrate-binding protein
13_1_40cm_scaffold_2862_4
unknown

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3504..4064
DNA (561bp) protein (187aa)

This feature has no annotations

13_1_40cm_scaffold_2862_5
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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4132..5010
DNA (879bp) protein (293aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI000376819B
Uncharacterized protein {ECO:0000313|EMBL:EFH83773.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racem
hypothetical protein
13_1_40cm_scaffold_2862_6
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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comp(5035..6705)
DNA (1671bp) protein (557aa)
deb:DehaBAV1_1081 argS; arginyl-tRNA synthetase (EC:6.1.1.19); K01887 arginyl-tRNA synthetase [EC:6.1.1.19] id=1241717 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
arginyl-tRNA synthetase (EC:6.1.1.19)
arginyl-tRNA synthetase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_scaffold_2862_7
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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comp(6702..7886)
DNA (1185bp) protein (395aa)
Major facilitator superfamily MFS_1 n=1 Tax=Deinococcus geothermalis (strain DSM 11300) RepID=Q1J1T2_DEIGD
major facilitator superfamily transporter Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
major facilitator superfamily protein
13_1_40cm_scaffold_2862_8
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(7965..9041)
DNA (1077bp) protein (359aa)
2-alkenal reductase (EC:1.3.1.74)
2-alkenal reductase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NL61_ROSCS
PDZ/DHR/GLGF domain-containing protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_scaffold_2862_9
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(9055..11154)
DNA (2100bp) protein (700aa)
4-alpha-glucanotransferase (EC:2.4.1.25) Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
alpha-amylase 1 (EC:3.2.1.1)
Glycoside hydrolase family 57 id=4815912 bin=GWC2_Deltaproteobacteria_55_46 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
13_1_40cm_scaffold_2862_10
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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11332..11916
DNA (585bp) protein (195aa)
Conserved uncharacterized protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q099E7_STIAD
hypothetical protein
Conserved uncharacterized protein {ECO:0000313|EMBL:ADO75596.1}; Uncharacterized protein {ECO:0000313|EMBL:EAU68346.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcale
Displaying 10 items

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