ggKbase home page

13_1_40cm_scaffold_3200

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_3200_1
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

1..702
DNA (702bp) protein (234aa)
undecaprenyl-diphosphatase; K06153 undecaprenyl-diphosphatase [EC:3.6.1.27] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
undecaprenyl pyrophosphate phosphatase (EC:3.6.1.27)
Undecaprenyl-diphosphatase n=1 Tax=Corynebacterium halotolerans YIM 70093 = DSM 44683 RepID=M1NMB8_9CORY
13_1_40cm_scaffold_3200_2
unknown

Not on your lists

comp(699..905)
DNA (207bp) protein (69aa)

This feature has no annotations

13_1_40cm_scaffold_3200_3
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

927..1730
DNA (804bp) protein (268aa)
short-chain dehydrogenase/reductase SDR; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Short-chain dehydrogenase/reductase SDR n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CAJ5_SPHTD
short-chain dehydrogenase/reductase SDR
13_1_40cm_scaffold_3200_4
RIFOXYC2_FULL_OD1_Campbellbacteria_35_25_curated, Campbellbacteria, Parcubacteria, Bacteria

Not on your lists

1730..2161
DNA (432bp) protein (144aa)
NUDIX hydrolase Tax=RIFOXYC2_FULL_OD1_Campbellbacteria_35_25_curated
NUDIX hydrolase id=8796 bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
NUDIX hydrolase
13_1_40cm_scaffold_3200_5
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

2158..3504
DNA (1347bp) protein (449aa)
nicotinic acid phosphoribosyltransferase; K00763 nicotinate phosphoribosyltransferase [EC:2.4.2.11] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Quinolinate phosphoribosyl transferase id=3927067 bin=GWF2_Lentisphaerae_57_35 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
nicotinic acid phosphoribosyltransferase
13_1_40cm_scaffold_3200_6
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

3483..4223
DNA (741bp) protein (247aa)
glutamine amidotransferase; K07090 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein; K07090 id=24435617 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
hypothetical protein
13_1_40cm_scaffold_3200_7
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

4247..4489
DNA (243bp) protein (81aa)
Uncharacterized protein id=4013233 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Uncharacterized protein {ECO:0000313|EMBL:CCF82863.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source
hypothetical protein
13_1_40cm_scaffold_3200_8
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

4672..5331
DNA (660bp) protein (220aa)
metallo-beta-lactamase-like protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
metallo-beta-lactamase-like protein id=14628680 bin=bin8_Chloro species=Streptomyces sp. ATexAB-D23 genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
metallo-beta-lactamase-like protein
13_1_40cm_scaffold_3200_9
unknown

Not on your lists

comp(5640..5852)
DNA (213bp) protein (71aa)

This feature has no annotations

13_1_40cm_scaffold_3200_10
unknown

Not on your lists

comp(6339..7307)
DNA (969bp) protein (323aa)

This feature has no annotations

13_1_40cm_scaffold_3200_11
unknown

Not on your lists

comp(7595..7720)
DNA (126bp) protein (42aa)

This feature has no annotations

13_1_40cm_scaffold_3200_12
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

7809..8234
DNA (426bp) protein (142aa)
lipoate-protein ligase B; K03801 lipoyl(octanoyl) transferase [EC:2.3.1.181] Tax=RBG_16_Actinobacteria_68_12_curated
Octanoyltransferase n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U817_MYXSD
lipoate-protein ligase B
13_1_40cm_scaffold_3200_13
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(8194..9108)
DNA (915bp) protein (305aa)
putative L-asparaginase; K13051 beta-aspartyl-peptidase (threonine type) [EC:3.4.19.5] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
asparaginase (EC:3.5.1.1)
Asparaginase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CEB9_THET1
13_1_40cm_scaffold_3200_14
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(9108..9581)
DNA (474bp) protein (158aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein id=14626844 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_scaffold_3200_15
unknown

Not on your lists

9726..9893
DNA (168bp) protein (56aa)

This feature has no annotations

13_1_40cm_scaffold_3200_16
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(9915..11417)
DNA (1503bp) protein (501aa)
Glucose-methanol-choline oxidoreductase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TF66_9CHLR
Glucose-methanol-choline oxidoreductase {ECO:0000313|EMBL:EFH90466.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Kte
GMC oxidoreductase
Displaying 16 items

View Taxonomy