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13_1_40cm_scaffold_393

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_393_1
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..357
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Amycolatopsis alba RepID=UPI00035DFA40
LuxR family two component transcriptional regulator
Two-component system response regulator {ECO:0000313|EMBL:EWM63904.1}; TaxID=457406 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora s
13_1_40cm_scaffold_393_2
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(753..1313)
DNA (561bp) protein (187aa)
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18); K10773 endonuclease III [EC:4.2.99.18] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18)
Endonuclease III n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4ECN8_9CHLR
13_1_40cm_scaffold_393_3
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

1477..2058
DNA (582bp) protein (194aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CFG7_THET1
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
ECF subfamily RNA polymerase sigma-24 subunit
13_1_40cm_scaffold_393_4
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

2068..2310
DNA (243bp) protein (81aa)
anti-sigma factor n=1 Tax=Streptomyces sp. Amel2xE9 RepID=UPI0003780652
Anti-sigma factor Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_scaffold_393_5
unknown

Not on your lists

2453..2980
DNA (528bp) protein (176aa)

This feature has no annotations

13_1_40cm_scaffold_393_6
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(2874..3617)
DNA (744bp) protein (248aa)
nth; endonuclease III (EC:4.2.99.18) Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
endonuclease III (EC:4.2.99.18)
Endonuclease III (DNA-(Apurinic or apyrimidinic site) lyase) id=4153746 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_scaffold_393_7
R_OD1_Kaiserbacteria_54_11b, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

comp(3627..4163)
DNA (537bp) protein (179aa)
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI00036C34FF
secreted protein Tax=RIFCSPHIGHO2_02_FULL_OD1_Kaiserbacteria_54_11b_curated
hypothetical protein
13_1_40cm_scaffold_393_8
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

4171..4917
DNA (747bp) protein (249aa)
ABC transporter-like protein; K10041 putative glutamine transport system ATP-binding protein [EC:3.6.3.-] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
ABC-type polar amino acid transport system, ATPase component n=1 Tax=Brevibacillus sp. BC25 RepID=J2HB53_9BACL
glnQ; glutamine ABC transporter ATP-binding protein
13_1_40cm_scaffold_393_9
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

4938..5843
DNA (906bp) protein (302aa)
ABC-type transporter, periplasmic subunit family 3 n=1 Tax=Frankia sp. CN3 RepID=G6HHK7_9ACTO
family 3 extracellular solute-binding protein; K10005 glutamate transport system substrate-binding protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
glnH; protein GlnH
13_1_40cm_scaffold_393_10
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

5916..6584
DNA (669bp) protein (223aa)
Polar amino acid ABC transporter, inner membrane subunit n=2 Tax=Geobacillus RepID=E3IGM8_GEOS0
polar amino acid ABC transporter inner membrane subunit; K10040 putative glutamine transport system permease protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
polar amino acid ABC transporter inner membrane subunit
13_1_40cm_scaffold_393_11
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

6606..7316
DNA (711bp) protein (237aa)
Amino acid ABC transporter membrane protein 2, PAAT family n=1 Tax=Desulfovibrio africanus PCS RepID=M5Q2D1_DESAF
glutamine abc transporter glutamine-binding protein; K02029 polar amino acid transport system permease protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
polar amino acid ABC transporter inner membrane subunit
13_1_40cm_scaffold_393_12
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

7468..8745
DNA (1278bp) protein (426aa)
Extracellular ligand-binding receptor n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TDL2_9CHLR
Extracellular ligand-binding receptor {ECO:0000313|EMBL:EFH88357.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobact
extracellular ligand-binding receptor
13_1_40cm_scaffold_393_13
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

8812..9861
DNA (1050bp) protein (350aa)
UniRef90_I4EJR3 ABC-type branched-chain amino acid transport system, permease component n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EJR3_9BACT id=1247736 bin=RBG9 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
amino acid/amide ABC transporter membrane protein 1, HAAT family Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
Branched-chain amino acid ABC-type transport system permease component
13_1_40cm_scaffold_393_14

Not on your lists

9858..11072
DNA (1215bp) protein (405aa)
Putative ABC-type branched-chain amino acid transport system, permease component n=1 Tax=mine drainage metagenome RepID=E6Q427_9ZZZZ
Putative ABC-type branched-chain amino acid transport system, permease component {ECO:0000313|EMBL:CBI01986.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" sou
inner-membrane translocator
13_1_40cm_scaffold_393_15
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

11069..11851
DNA (783bp) protein (261aa)
ABC transporter related n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NKG5_ROSCS
ABC transporter-like protein
ABC transporter related {ECO:0000313|EMBL:ABU57985.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus cas
13_1_40cm_scaffold_393_16
Arthrobacter sp. IHBB 11108, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11855..12565
DNA (711bp) protein (237aa)
amino acid ABC transporter ATPase n=1 Tax=Arthrobacter sp. 135MFCol5.1 RepID=UPI000361F416
amino acid ABC transporter ATPase
Amino acid ABC transporter ATPase {ECO:0000313|EMBL:AJT42714.1}; TaxID=1618207 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. IHBB 11108.;"
13_1_40cm_scaffold_393_17
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

12661..13953
DNA (1293bp) protein (431aa)
polynucleotide adenylyltransferase/metal dependent phosphohydrolase Tax=RBG_16_RIF_CHLX_70_13_curated
Putative domain HDIG-containing protein id=4952081 bin=GWC2_Chloroflexi_73_18 species=Spirochaeta thermophila genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
polynucleotide adenylyltransferase/metal dependent phosphohydrolase
13_1_40cm_scaffold_393_18
unknown

Not on your lists

comp(13960..14295)
DNA (336bp) protein (112aa)

This feature has no annotations

13_1_40cm_scaffold_393_19
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(14341..15282)
DNA (942bp) protein (314aa)
Peptide chain release factor 2 n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CFF9_THET1
peptide chain release factor 2; K02836 peptide chain release factor 2 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
peptide chain release factor 2
13_1_40cm_scaffold_393_20
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(15468..15665)
DNA (198bp) protein (66aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_scaffold_393_21
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(15918..16811)
DNA (894bp) protein (298aa)
NAD-dependent epimerase/dehydratase Tax=RBG_16_Chloroflexi_63_12_curated
NAD-dependent epimerase/dehydratase id=3081297 bin=GWC2_Nitrospirae_57_13 species=unknown genus=Magnetococcus taxon_order=Magnetococcales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
NAD-dependent epimerase/dehydratase
13_1_40cm_scaffold_393_22
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(16835..17560)
DNA (726bp) protein (242aa)
prolipoprotein diacylglyceryl transferase; K13292 phosphatidylglycerol:prolipoprotein diacylglycerol transferase [EC:2.-.-.-] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Prolipoprotein diacylglyceryl transferase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CCX3_THET1
prolipoprotein diacylglyceryl transferase
13_1_40cm_scaffold_393_23
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(17638..18444)
DNA (807bp) protein (269aa)
prolipoprotein diacylglyceryl transferase; K13292 phosphatidylglycerol:prolipoprotein diacylglycerol transferase [EC:2.-.-.-] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Prolipoprotein diacylglyceryl transferase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C8C4_SPHTD
prolipoprotein diacylglyceryl transferase
13_1_40cm_scaffold_393_24
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(18524..21118)
DNA (2595bp) protein (865aa)
Protein translocase subunit SecA n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KY62_THERP
protein translocase subunit secA; K03070 preprotein translocase subunit SecA Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
secA; Preprotein translocase subunit SecA
13_1_40cm_scaffold_393_25
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(21139..22128)
DNA (990bp) protein (330aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1); K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase id=4803694 bin=GWC2_Chloroflexi_73_18 species=Dehalogenimonas lykanthroporepellens genus=Dehalogenimonas taxon_order=unknown taxon_class=Dehalococcoidia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
13_1_40cm_scaffold_393_26
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

22155..22370
DNA (216bp) protein (72aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_scaffold_393_27
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(22341..23132)
DNA (792bp) protein (264aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_scaffold_393_28
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(23206..24309)
DNA (1104bp) protein (368aa)
Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67T84_SYMTH
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein
13_1_40cm_scaffold_393_29
GWF2_WWE3_42_42, WWE3, Bacteria

Not on your lists

comp(24312..25775)
DNA (1464bp) protein (488aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EI95_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:KKS60854.1}; TaxID=1619142 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWF2_42_42.;"
13_1_40cm_scaffold_393_30
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(25772..26395)
DNA (624bp) protein (208aa)
Phosphoribosyltransferase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C144_SPHTD
amidophosphoribosyltransferase-like protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
phosphoribosyltransferase
Displaying items 1-30 of 56 in total

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