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13_1_40cm_scaffold_6945

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_6945_1
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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comp(1..537)
DNA (537bp) protein (179aa)
Na+/proline symporter Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
13_1_40cm_scaffold_6945_2
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1210..1638)
DNA (429bp) protein (143aa)
Na+/proline symporter n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5UBV1_9BACT
Na+/proline symporter {ECO:0000313|EMBL:CCZ75480.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes fi
13_1_40cm_scaffold_6945_3
unknown

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1752..2330
DNA (579bp) protein (193aa)

This feature has no annotations

13_1_40cm_scaffold_6945_4
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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2648..3196
DNA (549bp) protein (183aa)
DNA polymerase III subunit alpha (EC:2.7.7.7); K02337 DNA polymerase III subunit alpha [EC:2.7.7.7] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_scaffold_6945_5
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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3569..4309
DNA (741bp) protein (247aa)
Putative Histidine kinase n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EKD8_9CHLR
phoR5; sensor histidine kinase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
sensor histidine kinase
13_1_40cm_scaffold_6945_6
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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comp(4306..5457)
DNA (1152bp) protein (384aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_scaffold_6945_trna_1
unknown

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comp(5493..5577)
DNA (85bp)
transferRNA
13_1_40cm_scaffold_6945_7
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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comp(5582..6394)
DNA (813bp) protein (271aa)
Inositol-1-monophosphatase; K01092 myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Archaeal fructose-1,6-bisphosphatase n=1 Tax=Congregibacter litoralis KT71 RepID=A4A472_9GAMM
inositol monophosphatase
13_1_40cm_scaffold_6945_8
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6375..6776)
DNA (402bp) protein (134aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q132A2_RHOPS
response regulator receiver
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ABE41087.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomona
13_1_40cm_scaffold_6945_9
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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6827..7420
DNA (594bp) protein (198aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8GD43_CHLAD
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
ECF subfamily RNA polymerase sigma-24 subunit
13_1_40cm_scaffold_6945_10
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

7468..8145
DNA (678bp) protein (226aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_scaffold_6945_11
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

8162..9025
DNA (864bp) protein (288aa)
DNA polymerase I; K02335 DNA polymerase I [EC:2.7.7.7] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
polA; DNA polymerase I (EC:2.7.7.7)
DNA polymerase I id=4733024 bin=GWC2_Chloroflexi_73_18 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Displaying 12 items

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