ggKbase home page

13_1_40cm_scaffold_3257_17

Organism: 13_1_40CM_Chloroflexi_68_21

partial RP 17 / 55 BSCG 17 / 51 ASCG 6 / 38
Location: 12741..13388

Top 3 Functional Annotations

Value Algorithm Source
SAF-like family protein n=1 Tax=Nocardiopsis halotolerans RepID=UPI0003489509 similarity UNIREF
DB: UNIREF100
  • Identity: 33.5
  • Coverage: 221.0
  • Bit_score: 81
  • Evalue 9.40e-13
Flp pilus assembly protein CpaB Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 50.9
  • Coverage: 212.0
  • Bit_score: 203
  • Evalue 3.90e-49
Flp pilus assembly protein CpaB similarity KEGG
DB: KEGG
  • Identity: 34.6
  • Coverage: 162.0
  • Bit_score: 74
  • Evalue 4.20e-11

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_RIF_CHLX_71_12 → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 648
TTGATCGGCCAGCGCGCGCTCATCGCCGTCGCGGTCGCGTCCGGCCTGCTCGCGGGAGTCCTCTACTACGTGGGCGTCCAGCGCACCTCGGTCTTGGTCGCGGCACGCGATCTGGATGCGACACATCCGCTCGCCGCGGATGACCTCGCGACCGTATCGCTCCCTCCGGACGCCGTGCCCGCCGGCGCCGTCGTCGACGTCGTCGCCGCGCTCGGCAAGATCCCGCGCGCGCCGCTCTGGCGTGGGCAGGTCGTTCTCCACGCGGCGCTCGCCGAGTACGCGGCCGCGTTCCACACGGGCCTCGCGCTGCCGAGAGGGATGCGCGCCGTCGCGCTCCCAGTCGGCGCGGCGCAGGCCGTGGGTGGCGCTCTCGCACCGGGCGCCCGGGTCGACGTCCTCGCGGTGCCGGTCGGAGGTCGTGCGCCCGCGGGTCGCACCACCGAGCTCCTGGCCCAAGCCGCGATGGTCCTCGATGTGCGTGCGGATACCGGCGCGCCTTACGGCGTCTCGATCGCGAAGAGTCCGCCCGCGTACGTGACGGAGCGCATGGGCAGCGTCGTGATCGCCATCGACCCGGCCGATGAGATCCGGTTCGCGGACCGCATCGCGACGAGCACTTTCGTGCTCGCGTTCGTCGGGTCGCGCTGA
PROTEIN sequence
Length: 216
LIGQRALIAVAVASGLLAGVLYYVGVQRTSVLVAARDLDATHPLAADDLATVSLPPDAVPAGAVVDVVAALGKIPRAPLWRGQVVLHAALAEYAAAFHTGLALPRGMRAVALPVGAAQAVGGALAPGARVDVLAVPVGGRAPAGRTTELLAQAAMVLDVRADTGAPYGVSIAKSPPAYVTERMGSVVIAIDPADEIRFADRIATSTFVLAFVGSR*