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13_1_40cm_scaffold_3257

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_3257_1
RBG_16_Actinobacteria_70_17_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(3..1241)
DNA (1239bp) protein (413aa)
ASPIC/UnbV domain-containing protein Tax=RBG_16_Actinobacteria_70_17_curated
conserved protein of unknown function with FG-GAP repeat
ASPIC/UnbV domain-containing protein id=14629595 bin=bin8_Chloro species=Labrenzia aggregata genus=Labrenzia taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi
13_1_40cm_scaffold_3257_2
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

1378..2343
DNA (966bp) protein (322aa)
xylF; D-xylose transport system substrate-binding protein; K10543 D-xylose transport system substrate-binding protein id=14629601 bin=bin8_Chloro species=Azospirillum sp. genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi
D-xylose-binding periplasmic protein xylF; K10543 D-xylose transport system substrate-binding protein Tax=RBG_16_Actinobacteria_68_21_curated
xylF; xylose ABC transporter, substrate-binding protein
13_1_40cm_scaffold_3257_3
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

2442..3845
DNA (1404bp) protein (468aa)
inner-membrane translocator; K10544 D-xylose transport system permease protein id=14629602 bin=bin8_Chloro species=Mesorhizobium alhagi genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi
inner-membrane translocator; K10544 D-xylose transport system permease protein Tax=CSP1_4_Chloroflexi
xylH; putative permease protein, ABC transporter
13_1_40cm_scaffold_3257_4
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

3797..4555
DNA (759bp) protein (253aa)
D-xylose transport ATP-binding protein XylG; K10545 D-xylose transport system ATP-binding protein [EC:3.6.3.17] Tax=CSP1_4_Chloroflexi
D-xylose transport ATP-binding protein XylG; K10545 D-xylose transport system ATP-binding protein [EC:3.6.3.17] id=14629603 bin=bin8_Chloro species=Pelagibacterium halotolerans genus=Pelagibacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi
xylG; D-xylose transport system ATP-binding protein
13_1_40cm_scaffold_3257_5
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

comp(4567..5934)
DNA (1368bp) protein (456aa)
xylA; xylose isomerase (EC:5.3.1.5); K01805 xylose isomerase [EC:5.3.1.5] id=14629605 bin=bin8_Chloro species=Pseudomonas psychrotolerans genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi
xylA; xylose isomerase (EC:5.3.1.5); K01805 xylose isomerase [EC:5.3.1.5] Tax=CSP1_4_Chloroflexi
xylose isomerase (EC:5.3.1.5)
13_1_40cm_scaffold_3257_6
Streptomyces ipomoeae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5972..6871)
DNA (900bp) protein (300aa)
Aldose 1-epimerase n=1 Tax=Streptomyces ipomoeae 91-03 RepID=L1L1U7_9ACTO
Aldose 1-epimerase {ECO:0000313|EMBL:EKX66852.1}; TaxID=698759 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ipomoeae 91-03.;"
Aldose epimerase family protein
13_1_40cm_scaffold_3257_7
RBG_16_Chloroflexi_64_43_curated, Chloroflexi, Bacteria

Not on your lists

6942..8090
DNA (1149bp) protein (383aa)
cystathionine gamma-synthase; K01739 cystathionine gamma-synthase [EC:2.5.1.48] Tax=RBG_16_Chloroflexi_64_43_curated
cystathionine gamma-synthase (EC:4.4.1.1)
Cystathionine gamma-lyase n=1 Tax=Thermobifida fusca (strain YX) RepID=Q47ST9_THEFY
13_1_40cm_scaffold_3257_8
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

8092..8610
DNA (519bp) protein (173aa)
GCN5-related N-acetyltransferase n=1 Tax=Geobacillus thermoglucosidasius (strain C56-YS93) RepID=F8D0V3_GEOTC
ykkB; putative N-acetyltransferase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
acetyltransferase
13_1_40cm_scaffold_3257_9
Marinithermus hydrothermalis, Marinithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

8645..9304
DNA (660bp) protein (220aa)
Cytochrome c biogenesis protein transmembrane region n=1 Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NLU6_MARHT
cytochrome c biogenesis protein transmembrane region
Cytochrome c biogenesis protein transmembrane region {ECO:0000313|EMBL:AEB11203.1}; TaxID=869210 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Marinithermus.;" source="Mar
13_1_40cm_scaffold_3257_10
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

9301..9939
DNA (639bp) protein (213aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IEP4_9CHLR id=1246133 bin=RBG9 species=Oscillochloris trichoides genus=Oscillochloris taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
13_1_40cm_scaffold_3257_11
unknown

Not on your lists

10013..10213
DNA (201bp) protein (67aa)

This feature has no annotations

13_1_40cm_scaffold_3257_12
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

10264..10659
DNA (396bp) protein (132aa)
ACT domain-containing protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_scaffold_3257_13
unknown

Not on your lists

10759..10929
DNA (171bp) protein (57aa)

This feature has no annotations

13_1_40cm_scaffold_3257_14
unknown

Not on your lists

10971..11321
DNA (351bp) protein (117aa)

This feature has no annotations

13_1_40cm_scaffold_3257_15
unknown

Not on your lists

11318..11803
DNA (486bp) protein (162aa)

This feature has no annotations

13_1_40cm_scaffold_3257_16
unknown

Not on your lists

11800..12744
DNA (945bp) protein (315aa)

This feature has no annotations

13_1_40cm_scaffold_3257_17
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

12741..13388
DNA (648bp) protein (216aa)
SAF-like family protein n=1 Tax=Nocardiopsis halotolerans RepID=UPI0003489509
Flp pilus assembly protein CpaB Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Flp pilus assembly protein CpaB
13_1_40cm_scaffold_3257_18
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

13389..13928
DNA (540bp) protein (180aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_scaffold_3257_19
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

14292..14549
DNA (258bp) protein (86aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_scaffold_3257_20
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

14546..15688
DNA (1143bp) protein (381aa)
Probable secretion atpase protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZT92_9PLAN
type II secretion system protein E Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
secretory protein
13_1_40cm_scaffold_3257_21
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

15685..16524
DNA (840bp) protein (280aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_scaffold_3257_22
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

17370..17642
DNA (273bp) protein (91aa)
Sec-independent protein translocase protein TatA n=1 Tax=Corynebacterium lipophiloflavum DSM 44291 RepID=C0XT35_9CORY
tatB; Sec-independent protein translocase protein TatB; K03116 sec-independent protein translocase protein TatA Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
tatB; Sec-independent protein translocase protein TatB
13_1_40cm_scaffold_3257_23
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

18162..19265
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) RepID=B2A7Y2_NATTJ
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein
13_1_40cm_scaffold_3257_24
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(19317..20633)
DNA (1317bp) protein (439aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037E08F0
hypothetical protein Tax=CG_Anaero_02
hypothetical protein
13_1_40cm_scaffold_3257_25
CG_Arma_02, Armatimonadetes, Bacteria

Not on your lists

comp(20630..21118)
DNA (489bp) protein (163aa)
TadE family protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CG83_THET1
TadE family protein Tax=CG_Arma_02
TadE family protein
13_1_40cm_scaffold_3257_26
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(21115..21582)
DNA (468bp) protein (156aa)
TadE family protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CG84_THET1
TadE family protein
TadE family protein {ECO:0000313|EMBL:ACZ41940.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
13_1_40cm_scaffold_3257_27
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(21695..22771)
DNA (1077bp) protein (359aa)
threonine aldolase (EC:4.1.2.5)
Threonine aldolase {ECO:0000313|EMBL:ACZ41150.1}; EC=4.1.2.5 {ECO:0000313|EMBL:ACZ41150.1};; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1
Threonine aldolase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CDZ4_THET1
Displaying 27 items

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