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13_1_40cm_scaffold_3892_2

Organism: 13_1_40CM_Chloroflexi_68_21

partial RP 17 / 55 BSCG 17 / 51 ASCG 6 / 38
Location: comp(1452..2081)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B2U1_STRRD similarity UNIREF
DB: UNIREF100
  • Identity: 44.3
  • Coverage: 176.0
  • Bit_score: 143
  • Evalue 2.50e-31
ECF sigma factor AdsA Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 77.9
  • Coverage: 199.0
  • Bit_score: 305
  • Evalue 7.10e-80
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 44.3
  • Coverage: 176.0
  • Bit_score: 143
  • Evalue 7.20e-32

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Taxonomy

RLO_RIF_CHLX_71_12 → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 630
ATGGTCGCGGAGCACGCGTCGGTGAGGAAGGGAAGACTCGACCGCTTGAACGAAGGCGTCGCCAAGGTCACCGCACTTTCGCTCGAAGTCATCGGGCCGGTCCCGGACGTCATCGCGCGCGCCCGCTCGGGCGACCGGATGGCTTTTGCGGAGCTCTACGACCGCCACGTCGATTCCGTCTACCGCTATCTGCTCTATCGCGTGCGCGAGCCCTCCGATGCCGAGGACCTCACGAGCGAGGTTTTCACTCGTGCGTTCGCGAACATCCACCGCTACCGCTGGCAGGGCAAGTCGTTCCTCGCGTGGCTCTACACGATCGCGCGCAACGCGGTCACCGATCGGCGACGCCGGGAGCGTCCGACCGTCGACCTCGATAACGCGTTCGGCGTCGCGGAGGATGGACCGACCGCCCACGAGCGCGCGGTGCACGGCGAAGCCGTCGACGCGCTTCGGGGCGCGGTGAAGCATCTCACCACCGAACAGCAGGAGGTCATCGTCCTGCGATTCGTCGAGAACATGTCGAGCCGTCAGGTCGCGCAGGTGTTGGGCAAGAACGAAGGCGCGATCCGTGCATTGCAGTTCCGCGCGCTCGGTCGCCTAAGAAAGCTCTTAACGACCGAGGTCGCCTGA
PROTEIN sequence
Length: 210
MVAEHASVRKGRLDRLNEGVAKVTALSLEVIGPVPDVIARARSGDRMAFAELYDRHVDSVYRYLLYRVREPSDAEDLTSEVFTRAFANIHRYRWQGKSFLAWLYTIARNAVTDRRRRERPTVDLDNAFGVAEDGPTAHERAVHGEAVDALRGAVKHLTTEQQEVIVLRFVENMSSRQVAQVLGKNEGAIRALQFRALGRLRKLLTTEVA*