ggKbase home page

13_1_40cm_scaffold_3892

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_3892_1
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(33..1397)
DNA (1365bp) protein (455aa)
carboxyl-terminal protease; K03797 carboxyl-terminal processing protease [EC:3.4.21.102] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
carboxyl-terminal protease (EC:3.4.21.102); K03797 carboxyl-terminal processing protease [EC:3.4.21.102] id=14631421 bin=bin9_gal15 species=Thermanaerovibrio acidaminovorans genus=Thermanaerovibrio taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=bin9_gal15 organism_group=GAL15
carboxyl-terminal protease
13_1_40cm_scaffold_3892_2
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(1452..2081)
DNA (630bp) protein (210aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B2U1_STRRD
ECF sigma factor AdsA Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
ECF subfamily RNA polymerase sigma-24 subunit
13_1_40cm_scaffold_3892_3
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(2246..3376)
DNA (1131bp) protein (377aa)
C-terminal processing peptidase n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T625_9CYAN
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
C-terminal processing peptidase
13_1_40cm_scaffold_3892_4
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3399..4607)
DNA (1209bp) protein (403aa)
UBA/THIF-type NAD/FAD binding protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TNS5_9CHLR
Sulfur carrier protein adenylyltransferase ThiF {ECO:0000313|EMBL:AKF06625.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandara
molybdopterin biosynthesis protein MoeB
13_1_40cm_scaffold_3892_5
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

4663..5190
DNA (528bp) protein (176aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_scaffold_3892_6
unknown

Not on your lists

comp(5146..5529)
DNA (384bp) protein (128aa)

This feature has no annotations

13_1_40cm_scaffold_3892_7
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

5606..6409
DNA (804bp) protein (268aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein id=24426863 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
hypothetical protein
13_1_40cm_scaffold_3892_8
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

6419..9007
DNA (2589bp) protein (863aa)
dipeptidyl aminopeptidase/acylaminoacyl peptidase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Peptidase S9, prolyl oligopeptidase active site region id=1960774 bin=GWD2_Chloroflexi_49_16 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
peptidase S9, prolyl oligopeptidase active site region
13_1_40cm_scaffold_3892_9
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

9487..9777
DNA (291bp) protein (97aa)
PilT protein domain protein id=4800070 bin=GWC2_Chloroflexi_73_18 species=unknown genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
PilT protein domain-containing protein Tax=GWC2_RIF_CHLX_73_18_curated
13_1_40cm_scaffold_3892_10
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

9782..9988
DNA (207bp) protein (69aa)
Fumarate reductase/succinate dehydrogenase flavoprotein domain protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TZ94_9CHLR
phytoene dehydrogenase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
Phytoene dehydrogenase-related protein
Displaying 10 items

View Taxonomy