ggKbase home page

13_1_40cm_scaffold_4738

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_4738_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(3..719)
DNA (717bp) protein (239aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3G6_GEMAT
dnaA; chromosomal replication initiator protein DnaA; K02313 chromosomal replication initiator protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Chromosomal replication initiator protein dnaA
13_1_40cm_scaffold_4738_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists


845..1006
DNA (162bp) protein (54aa)
Ribosomal protein L34 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEQ0_GEMAT
rpmH; 50S ribosomal protein L34; K02914 large subunit ribosomal protein L34 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
rpmH; 50S ribosomal protein L34
13_1_40cm_scaffold_4738_3
Cyanothece sp. PCC 7822, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

1341..1568
DNA (228bp) protein (76aa)
Putative membrane protein insertion efficiency factor n=1 Tax=Cyanothece sp. (strain PCC 7822) RepID=E0UEP1_CYAP2
hypothetical protein
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=497965 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococca
13_1_40cm_scaffold_4738_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

1640..3343
DNA (1704bp) protein (568aa)
Membrane protein insertase YidC n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEP7_GEMAT
oxaA; inner membrane protein OxaA; K03217 preprotein translocase subunit YidC Tax=RBG_16_Gemmatimonadetes_66_8_curated
Membrane protein oxaA
13_1_40cm_scaffold_4738_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

3372..4721
DNA (1350bp) protein (450aa)
trmE; putative tRNA modification GTPase TrmE; K03650 tRNA modification GTPase [EC:3.6.-.-] Tax=RBG_16_Gemmatimonadetes_66_8_curated
tRNA modification GTPase MnmE n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEP6_GEMAT
trmE; putative tRNA modification GTPase TrmE
13_1_40cm_scaffold_4738_6
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

4791..6230
DNA (1440bp) protein (480aa)
Peptidase S8 and S53 subtilisin kexin sedolisin n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C639_SPHTD
peptidase S8 and S53 subtilisin kexin sedolisin
Peptidase S8 and S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:ACZ37577.1}; Flags: Precursor;; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae;
13_1_40cm_scaffold_4738_7
CSP1_5_NC10, NC10, Bacteria

Not on your lists

6366..6878
DNA (513bp) protein (171aa)
hypothetical protein id=14429046 bin=bin3_NC10 species=Verrucomicrobium sp. 3C genus=Verrucomicrobium taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=bin3_NC10 organism_group=NC10
hypothetical protein Tax=CSP1_5_NC10
13_1_40cm_scaffold_4738_8
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(6875..7846)
DNA (972bp) protein (324aa)
YVTN beta-propeller repeat-containing protein id=14429063 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
YVTN beta-propeller repeat-containing protein Tax=CSP1_5_NC10
40-residue YVTN family beta-propeller repeat-containing protein
13_1_40cm_scaffold_4738_9
Methylomicrobium album, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7843..8508)
DNA (666bp) protein (222aa)
Putative low-complexity protein n=1 Tax=Methylomicrobium album BG8 RepID=H8GMI0_METAL
Putative low-complexity protein {ECO:0000313|EMBL:EIC28220.1}; TaxID=686340 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methy
hypothetical protein
13_1_40cm_scaffold_4738_10
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8505..9587)
DNA (1083bp) protein (361aa)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI000367365C
extracellular solute-binding protein family 3
Extracellular solute-binding protein family 3 {ECO:0000313|EMBL:CCC97327.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;"
13_1_40cm_scaffold_4738_11
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9748..10971)
DNA (1224bp) protein (408aa)
Methanol dehydrogenase large subunit protein n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RRK8_9RHIZ
Methanol dehydrogenase {ECO:0000313|EMBL:KGM31741.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosu
putative methanol dehydrogenase MoxF
Displaying 11 items

View Taxonomy