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13_1_40cm_scaffold_12263

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_12263_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(85..2154)
DNA (2070bp) protein (690aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7N3_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
surface antigen (D15)
13_1_40cm_scaffold_12263_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(2165..3217)
DNA (1053bp) protein (351aa)
Peptidase S9B dipeptidylpeptidase IV domain protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MFK1_RHOM4
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
surface antigen (D15)
13_1_40cm_scaffold_12263_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3223..3648)
DNA (426bp) protein (142aa)
Ribosomal silencing factor RsfS n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7N4_GEMAT
hypothetical protein; K09710 ribosome-associated protein Tax=GWC2_Gemmatimonadetes_71_10_curated
iojap-like protein
13_1_40cm_scaffold_12263_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists


comp(3641..4054)
DNA (414bp) protein (138aa)
50S ribosomal protein L9 n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XY91_9BACT
rplI; 50S ribosomal protein L9; K02939 large subunit ribosomal protein L9 Tax=RBG_16_Gemmatimonadetes_66_8_curated
50S ribosomal protein L9
13_1_40cm_scaffold_12263_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(4075..4926)
DNA (852bp) protein (284aa)
hypothetical membrane protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical membrane protein
13_1_40cm_scaffold_12263_6
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists


comp(4928..5149)
DNA (222bp) protein (74aa)
30S ribosomal protein S18 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7N7_GEMAT
rpsR; 30S ribosomal protein S18; K02963 small subunit ribosomal protein S18 Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
rpsR; 30S ribosomal protein S18
13_1_40cm_scaffold_12263_7
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists


comp(5146..5520)
DNA (375bp) protein (125aa)
30S ribosomal protein S6 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7N8_GEMAT
rpsF; 30S ribosomal protein S6; K02990 small subunit ribosomal protein S6 Tax=GWC2_Gemmatimonadetes_71_10_curated
rpsF; 30S ribosomal protein S6
13_1_40cm_scaffold_12263_8
unknown

Not on your lists

5910..6545
DNA (636bp) protein (212aa)

This feature has no annotations

13_1_40cm_scaffold_12263_9
unknown

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7065..7235
DNA (171bp) protein (57aa)

This feature has no annotations

13_1_40cm_scaffold_12263_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(7232..8335)
DNA (1104bp) protein (368aa)
Ribosome-binding ATPase YchF n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7P0_GEMAT
GTP-binding protein; K06942 Tax=RBG_16_Gemmatimonadetes_66_8_curated
GTP-binding protein YchF
13_1_40cm_scaffold_12263_11
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(8336..8878)
DNA (543bp) protein (181aa)
pth; peptidyl-tRNA hydrolase (EC:3.1.1.29); K01056 peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] Tax=GWC2_Gemmatimonadetes_71_10_curated
pth; peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=PTH_GEMAT
13_1_40cm_scaffold_12263_12
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists


comp(8882..9454)
DNA (573bp) protein (191aa)
rplY; 50S ribosomal protein L25; K02897 large subunit ribosomal protein L25 Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; K02897 large subunit ribosomal protein L25 id=1249730 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
50S ribosomal protein L25
13_1_40cm_scaffold_12263_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(9579..10532)
DNA (954bp) protein (318aa)
prs; ribose-phosphate pyrophosphokinase (EC:2.7.6.1); K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1] Tax=RBG_16_Gemmatimonadetes_66_8_curated
prs; ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7Q1_GEMAT
13_1_40cm_scaffold_12263_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10584..11522)
DNA (939bp) protein (313aa)
Marine sediment metagenome DNA, contig: S01H4_L03438 Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_scaffold_12263_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11519..13768)
DNA (2250bp) protein (750aa)
Gliding-associated ABC transporter substrate-binding protein GldG n=1 Tax=candidate division WWE3 bacterium RAAC2_WWE3_1 RepID=V5RUE8_9BACT
ABC transporter Tax=RBG_16_Gemmatimonadetes_66_8_curated
gliding-associated ABC transporter substrate-binding protein GldG
13_1_40cm_scaffold_12263_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(13765..14709)
DNA (945bp) protein (315aa)
Fe(3+)-transporting ATPase (EC:3.6.3.30); K09687 antibiotic transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Fe(3+)-transporting ATPase (EC:3.6.3.30)
Fe(3+)-transporting ATPase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SFC0_RHOMR
Displaying 16 items

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