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13_1_40cm_scaffold_2021

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_2021_1
unknown

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1..96
DNA (96bp) protein (32aa)

This feature has no annotations

13_1_40cm_scaffold_2021_2
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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557..1309
DNA (753bp) protein (251aa)
Probable transcriptional regulatory protein NIDE0415 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAD3_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_scaffold_2021_3
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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1405..2013
DNA (609bp) protein (203aa)
ruvA; holliday junction DNA helicase RuvA (EC:3.6.1.-); K03550 holliday junction DNA helicase RuvA [EC:3.6.4.12] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
ruvA; holliday junction DNA helicase RuvA (EC:3.6.1.-)
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAD4_9BACT
13_1_40cm_scaffold_2021_4
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

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2017..2568
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAD5_9BACT
hypothetical protein Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
hypothetical protein
13_1_40cm_scaffold_2021_5
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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2617..3621
DNA (1005bp) protein (335aa)
ruvB; holliday junction ATP-dependent DNA helicase RuvB (EC:3.6.1.-)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016, ECO:0000313|EMBL:CBK40195.1}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=330214 species="Bacteria; Nitros
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAD6_9BACT
13_1_40cm_scaffold_2021_6
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

3810..4892
DNA (1083bp) protein (361aa)
pheA; p-protein, bifunctional chorismate mutase/prephenate dehydratase (EC:4.2.1.51 5.4.99.5); K14170 chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] Tax=RIFCSPLOWO2_02_FULL_Nitrospi
pheA; p-protein, bifunctional chorismate mutase/prephenate dehydratase (EC:4.2.1.51 5.4.99.5)
P-protein, bifunctional chorismate mutase/prephenate dehydratase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAD7_9BACT
13_1_40cm_scaffold_2021_7
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

4976..6067
DNA (1092bp) protein (364aa)
hisC; histidinol-phosphate aminotransferase (EC:2.6.1.9); K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hisC; histidinol-phosphate aminotransferase (EC:2.6.1.9)
Histidinol-phosphate aminotransferase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAD8_9BACT
13_1_40cm_scaffold_2021_8
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

6077..7090
DNA (1014bp) protein (338aa)
aroF; 3-deoxy-7-phosphoheptulonate synthase (EC:2.5.1.54); K03856 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
aroF; 3-deoxy-7-phosphoheptulonate synthase (EC:2.5.1.54)
3-deoxy-7-phosphoheptulonate synthase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAD9_9BACT
13_1_40cm_scaffold_2021_9
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

7214..8086
DNA (873bp) protein (291aa)
tyrA; prephenate dehydrogenase (EC:1.3.1.12); K04517 prephenate dehydrogenase [EC:1.3.1.12] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
tyrA; prephenate dehydrogenase (EC:1.3.1.12)
Prephenate dehydrogenase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAE0_9BACT
13_1_40cm_scaffold_2021_10
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

8154..9479
DNA (1326bp) protein (442aa)
aroA; 3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19); K00800 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
aroA; 3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAE1_9BACT
13_1_40cm_scaffold_2021_11
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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9794..10174
DNA (381bp) protein (127aa)
cmk; cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238, ECO:0000313|EMBL:CBK40201.1}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate ki
Cytidylate kinase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAE2_9BACT
13_1_40cm_scaffold_2021_12
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

10171..10872
DNA (702bp) protein (234aa)
putative acyltransferase (EC:2.3.-.-); K00655 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative acyltransferase (EC:2.3.-.-)
Putative Acyltransferase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAE3_9BACT
13_1_40cm_scaffold_2021_13
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists


10930..12198
DNA (1269bp) protein (423aa)
30S ribosomal protein S1 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAE4_9BACT
rpsA; 30S ribosomal protein S1
30S ribosomal protein S1 {ECO:0000313|EMBL:CBK40203.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Displaying 13 items

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