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13_1_40cm_scaffold_2751

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_2751_1
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..266
DNA (264bp) protein (88aa)
GTP-binding protein; K03665 GTP-binding protein HflX Tax=RBG_16_Deltaproteobacteria_47_11_curated
putative GTPase HflX, GTP-binding protein
GTPase HflX id=2170932 bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
13_1_40cm_scaffold_2751_2
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

263..970
DNA (708bp) protein (236aa)
nth; endonuclease III (EC:4.2.99.18); K10773 endonuclease III [EC:4.2.99.18] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
nth; endonuclease III (EC:4.2.99.18)
Endonuclease III n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PFY3_9BACT
13_1_40cm_scaffold_2751_3
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

967..1845
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PFY4_9BACT
yicC; hypothetical protein Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
yicC; hypothetical protein
13_1_40cm_scaffold_2751_4
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

1909..2586
DNA (678bp) protein (226aa)
gmk; guanylate kinase (EC:2.7.4.8); K00942 guanylate kinase [EC:2.7.4.8] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
gmk; guanylate kinase (EC:2.7.4.8)
Guanylate kinase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PFY5_9BACT
13_1_40cm_scaffold_2751_5
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

2583..2945
DNA (363bp) protein (121aa)
rpoZ; DNA-directed RNA polymerase subunit omega (EC:2.7.7.6); K03060 DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
rpoZ; DNA-directed RNA polymerase subunit omega (EC:2.7.7.6)
DNA-directed RNA polymerase subunit omega n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PFY6_9BACT
13_1_40cm_scaffold_2751_6
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

2968..4221
DNA (1254bp) protein (418aa)
coaBC; coenzyme A biosynthesis bifunctional protein coaBC (EC:4.1.1.36 6.3.2.5); K13038 phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase [EC:4.1.1.36 6.3.2.5] Tax=RIFCS
coaBC; coenzyme A biosynthesis bifunctional protein coaBC (EC:4.1.1.36 6.3.2.5)
Coenzyme A biosynthesis bifunctional protein CoaBC n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PFY7_9BACT
13_1_40cm_scaffold_2751_7
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

4357..4815
DNA (459bp) protein (153aa)
aroQ; 3-dehydroquinate dehydratase (EC:4.2.1.10); K03786 3-dehydroquinate dehydratase II [EC:4.2.1.10] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
aroQ; 3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PFY9_9BACT
13_1_40cm_scaffold_2751_8
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

4855..5415
DNA (561bp) protein (187aa)
Elongation factor P n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PFZ0_9BACT
efp; elongation factor P; K02356 elongation factor P Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
efp; elongation factor P
13_1_40cm_scaffold_2751_9
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

5412..5984
DNA (573bp) protein (191aa)
Acetyl CoA carboxylase, biotin carboxyl carrier protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PFZ1_9BACT
accB; acetyl Coa carboxylase, biotin carboxyl carrier protein
Acetyl CoA carboxylase, biotin carboxyl carrier protein {ECO:0000313|EMBL:CBK42178.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitr
13_1_40cm_scaffold_2751_10
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

6014..7363
DNA (1350bp) protein (450aa)
accC; acetyl-Coa carboxylase, biotin carboxylase (EC:6.4.1.2 6.3.4.14); K01961 acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curate
accC; acetyl-Coa carboxylase, biotin carboxylase (EC:6.4.1.2 6.3.4.14)
Acetyl-CoA carboxylase, biotin carboxylase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PFZ2_9BACT
13_1_40cm_scaffold_2751_11
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

7408..8049
DNA (642bp) protein (214aa)
thiE; thiamine-phosphate pyrophosphorylase (EC:2.5.1.3); K00788 thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
thiE; thiamine-phosphate pyrophosphorylase (EC:2.5.1.3)
Thiamine-phosphate synthase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PFZ3_9BACT
13_1_40cm_scaffold_2751_12
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(8030..8779)
DNA (750bp) protein (250aa)
bioD; dethiobiotin synthetase (EC:6.3.3.3); K01935 dethiobiotin synthetase [EC:6.3.3.3] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
bioD; dethiobiotin synthetase (EC:6.3.3.3)
ATP-dependent dethiobiotin synthetase BioD n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PFZ4_9BACT
13_1_40cm_scaffold_2751_13
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(8891..9658)
DNA (768bp) protein (256aa)
fabG4; 3-oxoacyl-ACP reductase (EC:1.1.1.100) Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
fabG4; 3-oxoacyl-ACP reductase (EC:1.1.1.100)
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PFZ6_9BACT
13_1_40cm_scaffold_2751_14
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

9688..10908
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PFZ7_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK42184.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
13_1_40cm_scaffold_2751_15
unknown

Not on your lists

11547..11756
DNA (210bp) protein (70aa)

This feature has no annotations

13_1_40cm_scaffold_2751_16
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

12239..13432
DNA (1194bp) protein (398aa)
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
13_1_40cm_scaffold_2751_17
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

13754..14140
DNA (387bp) protein (129aa)
scdA; stearoyl-CoA 9-desaturase (fragment) (EC:1.14.19.1); K00507 stearoyl-CoA desaturase (delta-9 desaturase) [EC:1.14.19.1] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
acyl-Coa desaturase (fragment) (EC:1.14.19.1)
Acyl-CoA desaturase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG03_9BACT
Displaying 17 items

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