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13_1_40cm_scaffold_3889

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_3889_1
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(1..1254)
DNA (1254bp) protein (418aa)
Chaperone protein ClpB n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PFY0_9BACT
clpB3; chaperone protein ClpB; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
clpB3; chaperone protein ClpB
13_1_40cm_scaffold_3889_2
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

1518..2372
DNA (855bp) protein (285aa)
ppnK; NAD(+) kinase (EC:2.7.1.23); K00858 NAD+ kinase [EC:2.7.1.23] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
ppnK; NAD(+) kinase (EC:2.7.1.23)
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PFX9_9BACT
13_1_40cm_scaffold_3889_3
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(2369..3685)
DNA (1317bp) protein (439aa)
putative ferredoxin-NADP(+) reductase (EC:1.18.1.2)
Putative Ferredoxin-NADP(+) reductase {ECO:0000313|EMBL:CBK42165.1}; EC=1.18.1.2 {ECO:0000313|EMBL:CBK42165.1};; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.
Putative Ferredoxin-NADP(+) reductase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PFX8_9BACT
13_1_40cm_scaffold_3889_4
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3807..4304)
DNA (498bp) protein (166aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
13_1_40cm_scaffold_3889_5
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(4329..5699)
DNA (1371bp) protein (457aa)
fumC; fumarate hydratase, class II (EC:4.2.1.2); K01679 fumarate hydratase, class II [EC:4.2.1.2] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
fumC; fumarate hydratase, class II (EC:4.2.1.2)
Fumarate hydratase class II n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PFX7_9BACT
13_1_40cm_scaffold_3889_6
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(5881..6198)
DNA (318bp) protein (106aa)
hypothetical protein id=14627895 bin=bin7_NC10_sister species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
hypothetical protein Tax=CSP1_6_Rokubacteria
GYD family protein
13_1_40cm_scaffold_3889_7
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

6348..6599
DNA (252bp) protein (84aa)
Uncharacterized protein n=2 Tax=Desulfovibrio africanus RepID=F3YXN6_DESAF
hypothetical protein Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
hypothetical protein
13_1_40cm_scaffold_3889_8
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(6612..7055)
DNA (444bp) protein (148aa)
gltA; Citrate synthase (EC:2.3.3.1); K01647 citrate synthase [EC:2.3.3.1] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
gltA; Citrate synthase (EC:2.3.3.1)
Citrate synthase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PFX4_9BACT
13_1_40cm_scaffold_3889_9
unknown

Not on your lists

7126..7509
DNA (384bp) protein (128aa)

This feature has no annotations

13_1_40cm_scaffold_3889_10
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

8254..8643
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PFX2_9BACT
hypothetical protein Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
hypothetical protein
13_1_40cm_scaffold_3889_11
unknown

Not on your lists

8721..9065
DNA (345bp) protein (115aa)

This feature has no annotations

13_1_40cm_scaffold_3889_12
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

9156..9506
DNA (351bp) protein (117aa)
putative arsenate reductase (EC:1.20.4.1); K00537 arsenate reductase [EC:1.20.4.1] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative arsenate reductase (EC:1.20.4.1)
Putative Arsenate reductase (Glutaredoxin) n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PFX0_9BACT
13_1_40cm_scaffold_3889_13
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(9658..10848)
DNA (1191bp) protein (397aa)
rnd; ribonuclease D (EC:3.1.13.5); K03684 ribonuclease D [EC:3.1.13.5] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
rnd; ribonuclease D (EC:3.1.13.5)
Ribonuclease D n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PFW8_9BACT
13_1_40cm_scaffold_3889_14
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(10886..11491)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PFW7_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK42154.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
13_1_40cm_scaffold_3889_15
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(11580..12326)
DNA (747bp) protein (249aa)
maeA; malate dehydrogenase (oxaloacetate-decarboxylating) (EC:1.1.1.38)
Malate dehydrogenase (Oxaloacetate-decarboxylating) {ECO:0000313|EMBL:CBK42152.1}; EC=1.1.1.38 {ECO:0000313|EMBL:CBK42152.1};; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiracea
Malate dehydrogenase (Oxaloacetate-decarboxylating) n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PFW5_9BACT
13_1_40cm_scaffold_3889_16
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(12402..13001)
DNA (600bp) protein (200aa)
maeA; malate dehydrogenase (oxaloacetate-decarboxylating) (EC:1.1.1.38); K00027 malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
maeA; malate dehydrogenase (oxaloacetate-decarboxylating) (EC:1.1.1.38)
Malate dehydrogenase (Oxaloacetate-decarboxylating) n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PFW5_9BACT
13_1_40cm_scaffold_3889_17
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

13208..13438
DNA (231bp) protein (77aa)
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
13_1_40cm_scaffold_3889_18
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

13551..14297
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PFW3_9BACT
hypothetical protein; K06888 Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
Displaying 18 items

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