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13_1_40cm_scaffold_5484

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_5484_1
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..426)
DNA (426bp) protein (142aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS
dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QTF5_9DELT
13_1_40cm_scaffold_5484_2
Edwardsiella tarda, Edwardsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(718..1086)
DNA (369bp) protein (123aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=500638 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacter
ilvB; Acetolactate synthase large subunit (EC:2.2.1.6)
Acetolactate synthase n=2 Tax=Edwardsiella tarda RepID=D4F9R7_EDWTA
13_1_40cm_scaffold_5484_3
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(1100..2431)
DNA (1332bp) protein (444aa)
acetolactate synthase large subunit; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
Acetolactate synthase n=1 Tax=Dickeya zeae (strain Ech1591) RepID=C6CGF9_DICZE
acetolactate synthase 2 catalytic subunit
13_1_40cm_scaffold_5484_4
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(2424..2732)
DNA (309bp) protein (103aa)
ilvC; ketol-acid reductoisomerase (EC:1.1.1.86); K00053 ketol-acid reductoisomerase [EC:1.1.1.86] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
ketol-acid reductoisomerase (EC:1.1.1.86)
Ketol-acid reductoisomerase n=1 Tax=Crocosphaera watsonii WH 0401 RepID=T2J4S5_CROWT
13_1_40cm_scaffold_5484_5
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(2772..3470)
DNA (699bp) protein (233aa)
ketol-acid reductoisomerase; K00053 ketol-acid reductoisomerase [EC:1.1.1.86] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
ketol-acid reductoisomerase (EC:1.1.1.86)
Ketol-acid reductoisomerase n=2 Tax=Synechococcus elongatus RepID=ILVC_SYNE7
13_1_40cm_scaffold_5484_6
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3597..4211
DNA (615bp) protein (205aa)
TetR family transcriptional regulator n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MN94_CORCM
TetR family transcriptional regulator
TetR family transcriptional regulator {ECO:0000313|EMBL:AFE05327.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.
13_1_40cm_scaffold_5484_7
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4208..4540
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82WP2_NITEU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAD84533.1}; TaxID=228410 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas eur
13_1_40cm_scaffold_5484_8
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4558..5364)
DNA (807bp) protein (269aa)
Oxidoreductase FAD/NAD(P)-binding domain protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MI66_RHOM4
oxidoreductase FAD/NAD(P)-binding domain-containing protein
Oxidoreductase FAD/NAD(P)-binding domain protein {ECO:0000313|EMBL:ACY48174.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;"
13_1_40cm_scaffold_5484_9
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(5405..5629)
DNA (225bp) protein (75aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRI9_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF40511.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strai
13_1_40cm_scaffold_5484_10
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(5652..6680)
DNA (1029bp) protein (343aa)
YVTN beta-propeller repeat-containing protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XD71_9BACT
YVTN beta-propeller repeat-containing protein {ECO:0000313|EMBL:EEF62017.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia s
YVTN beta-propeller repeat-containing protein
13_1_40cm_scaffold_5484_11
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

6767..7786
DNA (1020bp) protein (340aa)
PBS lyase HEAT domain-containing protein repeat-containing protein n=1 Tax=Natronorubrum sulfidifaciens JCM 14089 RepID=L9W1S7_9EURY
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
13_1_40cm_scaffold_5484_12
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

7848..8747
DNA (900bp) protein (300aa)
dehydrogenase id=14631562 bin=bin9_gal15 species=unknown genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=bin9_gal15 organism_group=GAL15
dehydrogenase Tax=CSP1_3_Armatimonadetes
3-beta hydroxysteroid dehydrogenase/isomerase family protein
13_1_40cm_scaffold_5484_13
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(8806..9903)
DNA (1098bp) protein (366aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INT6_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF41464.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacte
13_1_40cm_scaffold_5484_14
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

10638..10928
DNA (291bp) protein (97aa)
Sigma-24, ECF subfamily n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1II52_KORVE
ECF subfamily RNA polymerase sigma-24 factor
Sigma-24, ECF subfamily {ECO:0000313|EMBL:ABF43448.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strai
13_1_40cm_scaffold_5484_15
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10973..12214
DNA (1242bp) protein (414aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003701D31
Uncharacterized protein {ECO:0000313|EMBL:EPX61297.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cy
13_1_40cm_scaffold_5484_16
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

12604..12936
DNA (333bp) protein (111aa)
Thioredoxin n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IM32_KORVE
thioredoxin
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345
13_1_40cm_scaffold_5484_17
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(13015..13572)
DNA (558bp) protein (186aa)
LexA repressor {ECO:0000255|HAMAP-Rule:MF_00015}; EC=3.4.21.88 {ECO:0000255|HAMAP-Rule:MF_00015};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koriba
LexA repressor n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=LEXA_KORVE
LexA repressor
13_1_40cm_scaffold_5484_18
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13645..14415)
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Zymophilus raffinosivorans RepID=UPI00036DAA3D
Uncharacterized protein {ECO:0000313|EMBL:ERK30768.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
hypothetical protein
13_1_40cm_scaffold_5484_19
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(14522..15091)
DNA (570bp) protein (190aa)
LemA id=1791156 bin=GWB2_CP_45_9 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
LemA protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
13_1_40cm_scaffold_5484_20
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(15109..16203)
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YWY9_9BACT
hypothetical protein Tax=CG_Woesearch_02
hypothetical protein
13_1_40cm_scaffold_5484_21
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(16415..17587)
DNA (1173bp) protein (391aa)
kynureninase (EC:3.7.1.3); K01556 kynureninase [EC:3.7.1.3] Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
kynureninase (EC:3.7.1.3)
Kynureninase id=4829916 bin=GWC2_Ignavibacteria_56_12 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
13_1_40cm_scaffold_5484_22
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(17593..18942)
DNA (1350bp) protein (450aa)
Amino acid permease n=1 Tax=Brevibacillus panacihumi W25 RepID=V6LZB4_9BACL
Phenylalanine-specific permease Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
amino acid permease
13_1_40cm_scaffold_5484_23
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

19253..21406
DNA (2154bp) protein (718aa)
Diguanylate cyclase with GAF sensor n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IU62_KORVE
GAF sensor-containing diguanylate cyclase
Diguanylate cyclase with GAF sensor {ECO:0000313|EMBL:ABF39588.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versa
13_1_40cm_scaffold_5484_24
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

21373..21603
DNA (231bp) protein (77aa)
Diguanylate cyclase with GAF sensor n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IU62_KORVE
GAF sensor-containing diguanylate cyclase
Diguanylate cyclase with GAF sensor {ECO:0000313|EMBL:ABF39588.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versa
13_1_40cm_scaffold_5484_25
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

21785..22993
DNA (1209bp) protein (403aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA acetyltransferase id=1250066 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
13_1_40cm_scaffold_5484_26
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

23052..23528
DNA (477bp) protein (159aa)
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:ABF40214.1}; EC=1.1.1.35 {ECO:0000313|EMBL:ABF40214.1};; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobact
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ISD6_KORVE
3-hydroxyacyl-CoA dehydrogenase
Displaying 26 items

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