ggKbase home page

13_1_40cm_scaffold_1257

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_1257_1
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(197..361)
DNA (165bp) protein (55aa)
Sec-independent protein translocase protein TatA n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IV57_KORVE
twin arginine-targeting protein translocase
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source=
13_1_40cm_scaffold_1257_2
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(474..1712)
DNA (1239bp) protein (413aa)
Peptidase M20 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IV58_KORVE
peptidase M20
Peptidase M20 {ECO:0000313|EMBL:ABF39242.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345
13_1_40cm_scaffold_1257_3
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

1803..2321
DNA (519bp) protein (173aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064869}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064862};; (
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8WZT7_ACISM
beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ
13_1_40cm_scaffold_1257_4
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

2374..3150
DNA (777bp) protein (259aa)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IV60_KORVE
acyl-ACP-UDP-N-acetylglucosamine O-acyltransferase
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00387, ECO:0000256|SAAS:SAAS00064156}; Short=UDP-N-acetylglucosamine acyltransferase {ECO:0000256|HAMA
13_1_40cm_scaffold_1257_5
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

3294..4148
DNA (855bp) protein (285aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHU6_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF43554.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strai
13_1_40cm_scaffold_1257_6

Not on your lists

4167..4652
DNA (486bp) protein (162aa)
Smu13B n=1 Tax=uncultured organism RepID=Q0GNJ3_9ZZZZ
Smu13B {ECO:0000313|EMBL:ABI21608.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
DinB-like domain protein
13_1_40cm_scaffold_1257_7
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

4688..5656
DNA (969bp) protein (323aa)
Oxidoreductase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IV63_KORVE
oxidoreductase
Oxidoreductase {ECO:0000313|EMBL:ABF39237.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin34
13_1_40cm_scaffold_1257_8
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

5908..7002
DNA (1095bp) protein (365aa)
TonB-like protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHU5_KORVE
TonB-like protein
TonB-like protein {ECO:0000313|EMBL:ABF43555.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Elli
13_1_40cm_scaffold_1257_9
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(7054..7869)
DNA (816bp) protein (272aa)
Lysine decarboxylase transcriptional regulator, CadC n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHU2_KORVE
lysine decarboxylase transcriptional regulator CadC
Lysine decarboxylase transcriptional regulator, CadC {ECO:0000313|EMBL:ABF43558.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source=
13_1_40cm_scaffold_1257_10
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

8134..9063
DNA (930bp) protein (310aa)
tRNA dimethylallyltransferase {ECO:0000255|HAMAP-Rule:MF_00185}; EC=2.5.1.75 {ECO:0000255|HAMAP-Rule:MF_00185};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000255|HAMAP-Rule:MF_0018
tRNA dimethylallyltransferase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=MIAA_KORVE
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase
13_1_40cm_scaffold_1257_11
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9118..9486)
DNA (369bp) protein (123aa)
S23 ribosomal protein n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NDE3_DESAR
S23 ribosomal protein Tax=RBG_13_Deltaproteobacteria_58_19_curated
S23 ribosomal protein
13_1_40cm_scaffold_1257_12
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

9676..11055
DNA (1380bp) protein (460aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobact
Glycoside hydrolase, family 3-like protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHT6_KORVE
glycoside hydrolase
Displaying 12 items

View Taxonomy