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13_1_40cm_scaffold_7816

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_7816_1
RBG_16_Deltaproteobacteria_71_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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2..325
DNA (324bp) protein (108aa)
Response regulator of zinc sigma-54-dependent two-component system n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QIJ3_9DELT
two component sigma54 specific Fis family transcriptional regulator Tax=RBG_16_Deltaproteobacteria_71_12_curated
Fis family transcriptional regulator
13_1_40cm_scaffold_7816_2
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(355..1191)
DNA (837bp) protein (279aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HBQ5_ANADF
uroporphyrin-III C/tetrapyrrole methyltransferase
13_1_40cm_scaffold_7816_3
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1169..1534)
DNA (366bp) protein (122aa)
UPF0102 protein AnaeK_1969 n=2 Tax=Anaeromyxobacter RepID=B4UBD5_ANASK
hypothetical protein
UPF0102 protein AnaeK_1969 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobact
13_1_40cm_scaffold_7816_4
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1603..3354)
DNA (1752bp) protein (584aa)
Uncharacterized protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UDM8_MYXSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGC45717.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxoco
13_1_40cm_scaffold_7816_5
GWA2_Elusimicrobia_61_42_curated, Elusimicrobia, Bacteria

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comp(3379..3534)
DNA (156bp) protein (52aa)
50S ribosomal protein L19; K02884 large subunit ribosomal protein L19 Tax=GWA2_Elusimicrobia_61_42_curated
50S ribosomal protein L19 id=3602530 bin=GWA2_Elusi_like_61_42 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi
50S ribosomal protein L19
13_1_40cm_scaffold_7816_6
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3722..4411)
DNA (690bp) protein (230aa)
trmD; tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltrans
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=TRMD_ANADE
13_1_40cm_scaffold_7816_7
Rhodovulum sulfidophilum, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4414..4902)
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Deinococcus aquatilis RepID=UPI00035FBB9A
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=35806 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae;
ribosome maturation factor RimM
13_1_40cm_scaffold_7816_8
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(4909..5172)
DNA (264bp) protein (88aa)
30S ribosomal protein S16 n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MGL7_CORCM
rpsP; 30S ribosomal protein S16
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" sour
13_1_40cm_scaffold_7816_9
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5265..6140)
DNA (876bp) protein (292aa)
succinyl-CoA synthetase subunit alpha; K01902 succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] Tax=RBG_16_Anaeromyxobacter_69_14_curated
sucD; succinyl-CoA ligase subunit alpha (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit alpha n=4 Tax=Geobacillus RepID=L7ZX86_9BACI
13_1_40cm_scaffold_7816_10
unknown

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comp(6137..6580)
DNA (444bp) protein (148aa)

This feature has no annotations

13_1_40cm_scaffold_7816_11
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6581..7756)
DNA (1176bp) protein (392aa)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558};
sucC; succinyl-CoA synthetase subunit beta (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit beta n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=SUCC_ANADE
13_1_40cm_scaffold_7816_12
R_WOR_2_50_17, WOR-2, Bacteria

Not on your lists

7898..8842
DNA (945bp) protein (315aa)
Uncharacterized protein id=4987446 bin=GWA2_OP3_53_43 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_WOR_2_50_17_curated
hypothetical protein
13_1_40cm_scaffold_7816_13
Aquabacterium sp. NJ1, Aquabacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8830..9273
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Duganella zoogloeoides RepID=UPI00036814D3
Uncharacterized protein {ECO:0000313|EMBL:KGM41228.1}; TaxID=1538295 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Aquabacterium.;" source="Aquabacterium sp. NJ1.;"
hypothetical protein
13_1_40cm_scaffold_7816_14
Thauera aminoaromatica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10905..11291
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Thauera aminoaromatica S2 RepID=N6YP60_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:ENO83948.1}; TaxID=1234381 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera aminoaromatica S2.
hypothetical protein
Displaying 14 items

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