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13_1_40cm_scaffold_8612

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_8612_1
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

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3..410
DNA (408bp) protein (136aa)
MarR family transcriptional regulatory protein id=4047548 bin=GWC2_Nitrospirae_57_13 species=Gloeocapsa sp. PCC 7428 genus=Gloeocapsa taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
transcriptional regulator, MarR family Tax=GWC2_Nitrospirae_57_13_curated
MarR family transcriptional regulator
13_1_40cm_scaffold_8612_2
Burkholderia phymatum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(427..1269)
DNA (843bp) protein (281aa)
Intradiol ring-cleavage dioxygenase n=1 Tax=Burkholderia phymatum (strain DSM 17167 / STM815) RepID=B2JUH6_BURP8
intradiol ring-cleavage dioxygenase
Intradiol ring-cleavage dioxygenase {ECO:0000313|EMBL:ACC74698.1}; TaxID=391038 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkho
13_1_40cm_scaffold_8612_3
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1257..2273)
DNA (1017bp) protein (339aa)
Inner-membrane translocator n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5D1D1_VARPS
inner-membrane translocator
Inner-membrane translocator {ECO:0000313|EMBL:ACS22701.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source=
13_1_40cm_scaffold_8612_4
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2270..3133)
DNA (864bp) protein (288aa)
ABC transporter permease n=1 Tax=Variovorax paradoxus RepID=UPI00036B5362
Branched-chain amino acid ABC-type transport system, permease component {ECO:0000313|EMBL:EJL71665.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholde
putative branched-chain amino acid ABC transporter, permease protein
13_1_40cm_scaffold_8612_5
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3136..3762)
DNA (627bp) protein (209aa)
livF; Phosphate import ATP-binding protein pstB (EC:3.6.3.27)
UPI0003D6BE43 related cluster n=1 Tax=unknown RepID=UPI0003D6BE43
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KDR38551.1}; Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1) {ECO:0000313|EMBL:CDY73228.1}; TaxID=60547 species="Bacte
13_1_40cm_scaffold_8612_6
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3765..4487)
DNA (723bp) protein (241aa)
Putative branched-chain amino acid ABC transporter, ATP-binding protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XMW0_VARPD
putative branched-chain amino acid ABC transporter, ATP-binding protein
Putative branched-chain amino acid ABC transporter, ATP-binding protein {ECO:0000313|EMBL:AGU53599.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadac
13_1_40cm_scaffold_8612_7
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4490..5722)
DNA (1233bp) protein (411aa)
ABC-type branched-chain amino acid transport system, periplasmic component n=1 Tax=Variovorax sp. CF313 RepID=J2KEV6_9BURK
ABC-type branched-chain amino acid transport system, periplasmic component {ECO:0000313|EMBL:EJL71668.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkho
putative substrate-binding component of ABC transporter
13_1_40cm_scaffold_8612_8
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5719..6750)
DNA (1032bp) protein (344aa)
Alcohol dehydrogenase (EC:1.1.1.1)
Alcohol dehydrogenase, class IV n=1 Tax=Variovorax sp. CF313 RepID=J2KET3_9BURK
Alcohol dehydrogenase, class IV {ECO:0000313|EMBL:EJL71643.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp
13_1_40cm_scaffold_8612_9
Herbaspirillum sp. GW103, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6747..7403)
DNA (657bp) protein (219aa)
pcaJ; 3-oxoadipate CoA-transferase subunit B (EC:2.8.3.6)
3-oxoadipate CoA-transferase subunit B n=1 Tax=Herbaspirillum sp. GW103 RepID=I3CRW1_9BURK
3-oxoadipate CoA-transferase subunit B {ECO:0000313|EMBL:EIJ46354.1}; TaxID=1175306 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="
13_1_40cm_scaffold_8612_10
Burkholderia sacchari, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7400..8059)
DNA (660bp) protein (220aa)
pcaI; 3-oxoadipate CoA-transferase subunit A (EC:2.8.3.6)
3-oxoadipate CoA-transferase subunit A n=1 Tax=Janthinobacterium lividum RepID=UPI000288B43B
3-oxoadipate CoA-transferase {ECO:0000313|EMBL:KHD20105.1}; TaxID=159450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia
13_1_40cm_scaffold_8612_11
Burkholderia sp. SJ98, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8062..8430)
DNA (369bp) protein (123aa)
4-hydroxymuconic semialdehyde dehydrogenase n=2 Tax=Burkholderiaceae RepID=K8RKY9_9BURK
4-hydroxymuconic semialdehyde dehydrogenase {ECO:0000313|EMBL:EKS70671.1}; TaxID=406819 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source
putative aldehyde dehydrogenase
13_1_40cm_scaffold_8612_12
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8370..9485)
DNA (1116bp) protein (372aa)
Betaine-aldehyde dehydrogenase (EC:1.2.1.8)
betaine-aldehyde dehydrogenase n=1 Tax=Variovorax paradoxus RepID=UPI00036DB83E
Variovorax paradoxus strain MEDvA23 contig_84, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ21987.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
13_1_40cm_scaffold_8612_13
Burkholderia terrae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9495..9839)
DNA (345bp) protein (115aa)
4-nitrocatechol monooxygenase ferridoxin protein n=1 Tax=Burkholderia terrae BS001 RepID=I5CFF2_9BURK
4-nitrocatechol monooxygenase ferridoxin protein {ECO:0000313|EMBL:EIM94620.1}; TaxID=1171375 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;"
Rieske [2Fe-2S] domain-containing protein
13_1_40cm_scaffold_8612_14
Burkholderia sacchari, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9841..10284)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Burkholderia phymatum (strain DSM 17167 / STM815) RepID=B2JUH3_BURP8
Hydroxyquinol 1,2-dioxygenase {ECO:0000313|EMBL:KHD21656.1}; TaxID=159450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia
hypothetical protein
Displaying 14 items

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