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13_1_40cm_scaffold_12398

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_12398_1
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

3..401
DNA (399bp) protein (133aa)
pseudouridylate synthase, 23S RNA-specific; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] Tax=GWC2_Nitrospirae_56_14_curated
Pseudouridine synthase id=3598872 bin=GWC2_Nitrospirae-rel_56_14 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
RluA family pseudouridine synthase
13_1_40cm_scaffold_12398_2
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

435..638
DNA (204bp) protein (68aa)
Uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
13_1_40cm_scaffold_12398_3
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

705..3305
DNA (2601bp) protein (867aa)
M16 family peptidase (EC:3.4.24.-)
Peptidase, M16 (Pitrilysin) family {ECO:0000313|EMBL:ABF88305.1}; EC=3.4.24.- {ECO:0000313|EMBL:ABF88305.1};; TaxID=246197 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystoba
Peptidase, M16 (Pitrilysin) family n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1DD72_MYXXD
13_1_40cm_scaffold_12398_4
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3302..4150
DNA (849bp) protein (283aa)
50S ribosomal protein L11 methyltransferase; K02687 ribosomal protein L11 methyltransferase [EC:2.1.1.-] Tax=RBG_16_Anaeromyxobacter_69_14_curated
Ribosomal protein L11 methyltransferase n=2 Tax=Anaeromyxobacter RepID=B4UM90_ANASK
50S ribosomal protein L11 methyltransferase
13_1_40cm_scaffold_12398_5
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4153..4785
DNA (633bp) protein (211aa)
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U2V9_MYXSD
hypothetical protein
16S rRNA methyltransferase {ECO:0000313|EMBL:AKF79833.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myx
13_1_40cm_scaffold_12398_6
unknown

Not on your lists

4869..5228
DNA (360bp) protein (120aa)

This feature has no annotations

13_1_40cm_scaffold_12398_7
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6134..6715
DNA (582bp) protein (194aa)
pdxH; pyridoxamine 5'-phosphate oxidase (EC:1.4.3.5)
Pyridoxine/pyridoxamine 5'-phosphate oxidase {ECO:0000255|HAMAP-Rule:MF_01629}; EC=1.4.3.5 {ECO:0000255|HAMAP-Rule:MF_01629};; PNP/PMP oxidase {ECO:0000255|HAMAP-Rule:MF_01629}; Short=PNPOx {ECO:00002
Pyridoxine/pyridoxamine 5'-phosphate oxidase n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=PDXH_MYXXD
13_1_40cm_scaffold_12398_8
Dickeya dadantii, Dickeya, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6780..8108)
DNA (1329bp) protein (443aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=590409 species="Bacteria; Prote
Fumarate hydratase class II n=1 Tax=Dickeya dadantii (strain Ech586) RepID=D2C030_DICD5
fumarate hydratase, class II
13_1_40cm_scaffold_12398_9
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8215..8769
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MP56_CORCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFE60126.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyal
13_1_40cm_scaffold_12398_10
unknown

Not on your lists

8909..9190
DNA (282bp) protein (94aa)

This feature has no annotations

13_1_40cm_scaffold_12398_11
unknown

Not on your lists

9192..10217
DNA (1026bp) protein (342aa)

This feature has no annotations

13_1_40cm_scaffold_12398_12
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10219..10710)
DNA (492bp) protein (164aa)
Uncharacterized protein n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q099S9_STIAD
Uncharacterized protein {ECO:0000313|EMBL:KFA91162.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cy
hypothetical protein
Displaying 12 items

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