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13_1_40cm_scaffold_3230_11

Organism: 13_1_40CM_Deltaproteobacteria_68_24

partial RP 20 / 55 BSCG 17 / 51 MC: 1 ASCG 5 / 38
Location: 7996..8553

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 51.2
  • Coverage: 172.0
  • Bit_score: 158
  • Evalue 1.50e-36
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AHG88971.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.2
  • Coverage: 172.0
  • Bit_score: 158
  • Evalue 7.30e-36
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=14626591 bin=bin7_NC10_sister species=Acidothermus cellulolyticus genus=Acidothermus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 41.7
  • Coverage: 187.0
  • Bit_score: 113
  • Evalue 1.90e-22

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Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 558
GTGAGCGTAGAGGCGAAACGGGAGCGCTTCCAGTCGTCGACCCTGCCCCATCTCGATCGACTGGTTGCGCTGGCCTCCCGCTGGGCAGCTCGGCACGAGGCAGAGGATTACGTGCAGGAGACTTACGTTCGCGCCTGGAATGCCTTCGACCAGCTCCGCGACCCCGATGCGGCCTTTCCCTGGCTCTGCCAGATCCTGCGTGCGGTGGCCAGCGAGCGGCGCCGCACCCACGCGCGACGGCAGGAGCTGGTCTTCATCGCCCAGCTGGAAGAGGCGCACGAAGAGATCGTGGCGAGCGACGCACCCTCGCCCCTCGATGACCTGCTCTCGCGCCTGGAGTTCGGCAGGCTCCGCGAGGCGCTGCGATCGATCCCCGACGACTTCGCCGAAGCGGTGGAGCTTCATGACGTACACGGTCTGAAGTACAAGGAGATCGCACGGATCACCTCGGTGCCGATCGGCACGGTCATGAGCCGTATCAGCCGCGGCCGGCAGTTGCTGGCAGGGCTGCTCACCCTCACCGGCGAGAAGAGGGCCAAGCGCGGAGTGGCAACCTGA
PROTEIN sequence
Length: 186
VSVEAKRERFQSSTLPHLDRLVALASRWAARHEAEDYVQETYVRAWNAFDQLRDPDAAFPWLCQILRAVASERRRTHARRQELVFIAQLEEAHEEIVASDAPSPLDDLLSRLEFGRLREALRSIPDDFAEAVELHDVHGLKYKEIARITSVPIGTVMSRISRGRQLLAGLLTLTGEKRAKRGVAT*