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13_1_40cm_scaffold_3230

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_3230_1
unknown

Not on your lists

2..163
DNA (162bp) protein (54aa)

This feature has no annotations

13_1_40cm_scaffold_3230_2
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

316..984
DNA (669bp) protein (223aa)
Tax=RBG_16_Anaeromyxobacter_69_14_curated
13_1_40cm_scaffold_3230_3
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(991..1401)
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B4D2FC
Uncharacterized protein {ECO:0000313|EMBL:KIF35132.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
hypothetical protein
13_1_40cm_scaffold_3230_4
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1446..2876)
DNA (1431bp) protein (477aa)
YVTN family beta-propeller repeat protein n=1 Tax=Rhizobium sp. CF142 RepID=J2AQW0_9RHIZ
40-residue YVTN family beta-propeller repeat protein {ECO:0000313|EMBL:KFC74452.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" sourc
40-residue YVTN family beta-propeller repeat-containing protein
13_1_40cm_scaffold_3230_5
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2878..3288)
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI000289BEFA
Variovorax paradoxus strain MEDvA23 contig_5, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ36837.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonad
hypothetical protein
13_1_40cm_scaffold_3230_6
unknown

Not on your lists

3566..4222
DNA (657bp) protein (219aa)

This feature has no annotations

13_1_40cm_scaffold_3230_7
unknown

Not on your lists

comp(4242..4607)
DNA (366bp) protein (122aa)

This feature has no annotations

13_1_40cm_scaffold_3230_8
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4977..5822
DNA (846bp) protein (282aa)
Putative uncharacterized protein n=1 Tax=Methanoregula boonei (strain 6A8) RepID=A7I8G2_METB6
Uncharacterized protein {ECO:0000313|EMBL:AKF04126.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandara
hypothetical protein
13_1_40cm_scaffold_3230_9
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5847..6392
DNA (546bp) protein (182aa)
Putative secreted protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9P3A8_9DELT
YceI family protein
Putative secreted protein {ECO:0000313|EMBL:EPX56747.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="
13_1_40cm_scaffold_3230_10
RBG_16_Deltaproteobacteria_71_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6389..7552
DNA (1164bp) protein (388aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9P0W0_9DELT
Uncharacterized protein Tax=RBG_16_Deltaproteobacteria_71_12_curated
13_1_40cm_scaffold_3230_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

7996..8553
DNA (558bp) protein (186aa)
RNA polymerase sigma factor, sigma-70 family
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AHG88971.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=14626591 bin=bin7_NC10_sister species=Acidothermus cellulolyticus genus=Acidothermus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_scaffold_3230_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

8668..9429
DNA (762bp) protein (254aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG88972.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_3230_13
Enhygromyxa salina, Enhygromyxa, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9455..10207
DNA (753bp) protein (251aa)
Transcriptional regulator n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GB49_9DELT
Transcriptional regulator, LysR family protein {ECO:0000313|EMBL:KIG19306.1}; TaxID=215803 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Enhygromyxa.;" source="Enhygromyxa sali
LysR family transcriptional regulator
13_1_40cm_scaffold_3230_14
Paenibacillus borealis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10325..11200
DNA (876bp) protein (292aa)
Putative hydrolase or acyltransferase of alpha/beta superfamily n=1 Tax=Microvirga sp. WSM3557 RepID=I4YUI3_9RHIZ
alpha/beta hydrolase
Alpha/beta hydrolase {ECO:0000313|EMBL:AIQ59254.1}; TaxID=160799 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus borealis.;"
13_1_40cm_scaffold_3230_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

11281..11745
DNA (465bp) protein (155aa)
Membrane protein-like protein; K08983 putative membrane protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Membrane protein-like protein id=4761904 bin=GWA2_Elusimicrobia_69_24 species=Burkholderia gladioli genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
membrane protein-like protein
13_1_40cm_scaffold_3230_16
RBG_13_Actinobacteria_63_9_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11767..12144)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CDD1_9PLAN
DoxX family protein Tax=RBG_13_Actinobacteria_63_9_curated
DoxX family protein
13_1_40cm_scaffold_3230_17
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12267..12671
DNA (405bp) protein (135aa)
hit1; histidine triad protein; K02503 Hit-like protein involved in cell-cycle regulation Tax=RBG_16_Anaeromyxobacter_69_14_curated
histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation id=14011 bin=ACD18 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=ACD18 organism_group=OD1 (Parcubacteria) organism_desc= OD1
histidine triad (HIT) protein
13_1_40cm_scaffold_3230_18
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12684..14252
DNA (1569bp) protein (523aa)
GMC oxidoreductase family protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MN35_CORCM
choD1; GMC oxidoreductase family protein
GMC oxidoreductase family protein {ECO:0000313|EMBL:AFE08346.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" s
13_1_40cm_scaffold_3230_19
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14249..14719
DNA (471bp) protein (157aa)
Acetyltransferase, GNAT family n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QMW2_9DELT
Acetyltransferase {ECO:0000313|EMBL:KFA92395.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobac
acetyltransferase
Displaying 19 items

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