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13_1_40cm_scaffold_3887

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_3887_1
unknown

Not on your lists

3..341
DNA (339bp) protein (113aa)

This feature has no annotations

13_1_40cm_scaffold_3887_2
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

355..1233
DNA (879bp) protein (293aa)
dTDP-4-dehydrorhamnose reductase; K00067 dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
dTDP-4-dehydrorhamnose reductase id=1801936 bin=GWB2_Elusimicrobia_63_16 species=Emiliania huxleyi genus=Emiliania taxon_order=Isochrysidales taxon_class=unknown phylum=unknown tax=GWB2_Elusimicrobia_63_16 organism_group=Elusimicrobia
dTDP-4-dehydrorhamnose reductase
13_1_40cm_scaffold_3887_3
R_Omnitrophica_44_11, Omnitrophica, Bacteria

Not on your lists

1353..2165
DNA (813bp) protein (271aa)
methyltransferase family protein Tax=RIFCSPLOWO2_02_FULL_Omnitrophica_44_11_curated
Methylase involved in ubiquinone/menaquinone biosynthesis id=3841806 bin=GWA2_Elusimicrobia_69_24 species=Kordia algicida genus=Kordia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
methyltransferase
13_1_40cm_scaffold_3887_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(2162..3067)
DNA (906bp) protein (302aa)
Glycosyl transferase, family 2 id=3024521 bin=GWC2_Methylomirabilis_70_16 species=Rhodopseudomonas palustris genus=Rhodopseudomonas taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
glycosyl transferase family protein Tax=GWC2_Rokubacteria_70_16_curated
glycosyl transferase family protein
13_1_40cm_scaffold_3887_5
Streptomyces sp. Tu 6176, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3064..4032)
DNA (969bp) protein (323aa)
NAD-dependent dehydratase n=1 Tax=Streptomyces sp. PsTaAH-124 RepID=UPI000382945D
NAD-dependent dehydratase {ECO:0000313|EMBL:EYT83341.1}; TaxID=1470557 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. Tu 6176.;"
hypothetical protein
13_1_40cm_scaffold_3887_6
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(4029..4403)
DNA (375bp) protein (125aa)
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I971_CALAS
rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:BAM01809.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila
13_1_40cm_scaffold_3887_7
CG_Delta_07, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4558..5820)
DNA (1263bp) protein (421aa)
NDP-hexose 3-C-methyltransferase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4996
C-methyltransferase Tax=CG_Delta_07
hypothetical protein
13_1_40cm_scaffold_3887_8
unknown

Not on your lists

5948..7300
DNA (1353bp) protein (451aa)

This feature has no annotations

13_1_40cm_scaffold_3887_9
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7308..8075
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TX58_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EDP62976.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
hypothetical protein
13_1_40cm_scaffold_3887_10
unknown

Not on your lists

8068..8247
DNA (180bp) protein (60aa)

This feature has no annotations

13_1_40cm_scaffold_3887_11
Geobacter sp. M18, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8196..8855)
DNA (660bp) protein (220aa)
DNA-3-methyladenine glycosylase I (EC:3.2.2.20)
DNA-3-methyladenine glycosylase I {ECO:0000313|EMBL:ADW14696.1}; EC=3.2.2.20 {ECO:0000313|EMBL:ADW14696.1};; TaxID=443143 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Ge
DNA-3-methyladenine glycosylase I n=1 Tax=Geobacter sp. (strain M18) RepID=E8WJT3_GEOS8
13_1_40cm_scaffold_3887_12
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(8840..9562)
DNA (723bp) protein (241aa)
Haloacid dehalogenase domain protein hydrolase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U5W6_9CHLR
Haloacid dehalogenase domain protein hydrolase {ECO:0000313|EMBL:EFH80377.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" sour
HAD-superfamily hydrolase
13_1_40cm_scaffold_3887_13
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

9660..10517
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C3Q7_SPHTD
ClpP class periplasmic serine protease {ECO:0000313|EMBL:KCZ73438.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Meth
hypothetical protein
13_1_40cm_scaffold_3887_14
Bradyrhizobium sp. ORS 278, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10514..12442)
DNA (1929bp) protein (643aa)
Putative oxidoreductase subunit protein n=1 Tax=Bradyrhizobium sp. (strain ORS278) RepID=A4YST2_BRASO
oxidoreductase subunit protein
Putative oxidoreductase subunit protein {ECO:0000313|EMBL:CAL76958.1}; TaxID=114615 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Br
13_1_40cm_scaffold_3887_15
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12442..12900)
DNA (459bp) protein (153aa)
(2Fe-2S)-binding domain-containing protein; K03518 carbon-monoxide dehydrogenase small subunit [EC:1.2.99.2] Tax=RBG_16_Deltaproteobacteria_48_10_curated
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035E05AD
[2Fe-2S] binding domain protein
13_1_40cm_scaffold_3887_16
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(12897..14231)
DNA (1335bp) protein (445aa)
histidine ammonia-lyase (EC:4.3.1.3); K01745 histidine ammonia-lyase [EC:4.3.1.3] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Histidine ammonia-lyase n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=HUTH_SYMTH
histidine ammonia-lyase
13_1_40cm_scaffold_3887_17
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(14423..15079)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Kineosphaera limosa NBRC 100340 RepID=K6W724_9MICO
isoleucine patch superfamily enzyme, carbonic anhydrase/acetyltransferase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
ferripyochelin binding protein
13_1_40cm_scaffold_3887_18
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

15162..16001
DNA (840bp) protein (280aa)
phospho-2-dehydro-3-deoxyheptonate aldolase; K01626 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] Tax=GWA2_Rokubacteria_73_35_curated
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AXF1_RUBXD
13_1_40cm_scaffold_3887_19
Actinomyces sp. oral taxon 181, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15854..16597)
DNA (744bp) protein (248aa)
XRE family transcriptional regulator n=1 Tax=Brachybacterium squillarum RepID=UPI0002629B9D
DNA-binding response regulator MtrA {ECO:0000313|EMBL:EKY14791.1}; TaxID=1127690 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
13_1_40cm_scaffold_3887_20

Not on your lists

comp(16669..17484)
DNA (816bp) protein (272aa)
Uncharacterized protein {ECO:0000313|EMBL:AIA15716.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_1_40cm_scaffold_3887_21
Desulfosporosinus youngiae, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17575..17943)
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000370DB67
Sporulation protein, yteA family {ECO:0000313|EMBL:EHQ91515.1}; TaxID=768710 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus yo
TraR/DksA family transcriptional regulator
13_1_40cm_scaffold_3887_22
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17972..18289
DNA (318bp) protein (106aa)
Rhodanese-related sulfurtransferase n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4ES92_MODMB
Rhodanese-related sulfurtransferase
Rhodanese-related sulfurtransferase {ECO:0000313|EMBL:CCH86255.1}; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter mari
13_1_40cm_scaffold_3887_23
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

18441..19568
DNA (1128bp) protein (376aa)
major facilitator superfamily protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Major facilitator superfamily MFS_1 id=2146599 bin=GWB2_Deltaproteobacteria_65_81 species=Albidiferax ferrireducens genus=Albidiferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
major facilitator superfamily protein
13_1_40cm_scaffold_3887_24
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

19586..20359
DNA (774bp) protein (258aa)
Putative integral membrane protein DUF125 n=1 Tax=uncultured marine microorganism HF4000_APKG5H11 RepID=B3T8K1_9ZZZZ
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Ferritin-like domain fused to DUF125 family domain
13_1_40cm_scaffold_3887_25
unknown

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comp(20420..21019)
DNA (600bp) protein (200aa)

This feature has no annotations

13_1_40cm_scaffold_3887_26
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

21070..21846
DNA (777bp) protein (259aa)
Beta-lactamase domain protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C608_SPHTD
beta-lactamase domain-containing protein
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="S
13_1_40cm_scaffold_3887_27
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

21944..23158
DNA (1215bp) protein (405aa)
group 1 glycosyl transferase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Glycosyltransferase id=24550729 bin=RBG_19FT_COMBO_GAL15_69_19 species=Chthonomonas calidirosea genus=Chthonomonas taxon_order=Chthonomonadales taxon_class=Chthonomonadetes phylum=Armatimonadetes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
group 1 glycosyl transferase
13_1_40cm_scaffold_3887_28
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

23155..24369
DNA (1215bp) protein (405aa)
Glycosidase PH1107-related protein n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DM36_9BACL
glycosylase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
glycosidase
13_1_40cm_scaffold_3887_29
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

24424..25335
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CBE3_THET1
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
hypothetical protein
13_1_40cm_scaffold_3887_30
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(25332..26357)
DNA (1026bp) protein (342aa)
Oxidoreductase, molybdopterin binding {ECO:0000313|EMBL:CCF84890.1}; EC=1.8.3.1 {ECO:0000313|EMBL:CCF84890.1};; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Spha
nitrate reductase (NADH) (EC:1.7.1.1)
Oxidoreductase, molybdopterin binding n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EJM8_9CHLR
Displaying items 1-30 of 32 in total

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