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13_1_40cm_scaffold_5465

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_5465_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(3..851)
DNA (849bp) protein (283aa)
chorismate synthase (EC:4.2.3.5); K01736 chorismate synthase [EC:4.2.3.5] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
AroC; chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=AROC_PELTS
13_1_40cm_scaffold_5465_2
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

comp(848..1666)
DNA (819bp) protein (273aa)
shikimate dehydrogenase; K00014 shikimate dehydrogenase [EC:1.1.1.25] id=14629791 bin=bin8_Chloro species=Marinithermus hydrothermalis genus=Marinithermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=bin8_Chloro organism_group=Chloroflexi
shikimate dehydrogenase; K00014 shikimate dehydrogenase [EC:1.1.1.25] Tax=CSP1_4_Chloroflexi
aroE; shikimate 5-dehydrogenase
13_1_40cm_scaffold_5465_3
Anaerolinea thermophila, Anaerolinea, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(1663..2802)
DNA (1140bp) protein (380aa)
Putative uncharacterized protein n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8MY27_ANATU
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ64258.1}; TaxID=926569 species="Bacteria; Chloroflexi; Anaerolineae; Anaerolineales; Anaerolineaceae; Anaerolinea.;" source="Anaerolinea thermophi
13_1_40cm_scaffold_5465_4
Desulfovibrio alkalitolerans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2802..3182)
DNA (381bp) protein (127aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1121439 speci
Putative Holliday junction resolvase n=1 Tax=Desulfovibrio alkalitolerans DSM 16529 RepID=S7TF01_9DELT
Holliday junction resolvase YqgF
13_1_40cm_scaffold_5465_5
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(3186..4721)
DNA (1536bp) protein (512aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_scaffold_5465_6
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(4718..5338)
DNA (621bp) protein (207aa)
alanyl-tRNA synthetase (EC:6.1.1.7); K01872 alanyl-tRNA synthetase [EC:6.1.1.7] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_scaffold_5465_7
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(5335..5673)
DNA (339bp) protein (113aa)
alanyl-tRNA synthetase (EC:6.1.1.7); K01872 alanyl-tRNA synthetase [EC:6.1.1.7] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_scaffold_5465_8
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists


comp(5666..8251)
DNA (2586bp) protein (862aa)
alanyl-tRNA synthetase (EC:6.1.1.7); K01872 alanyl-tRNA synthetase [EC:6.1.1.7] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
alaS; alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KZ15_THERP
13_1_40cm_scaffold_5465_9
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

Not on your lists

comp(8454..8732)
DNA (279bp) protein (93aa)
hypothetical protein Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
13_1_40cm_scaffold_5465_10
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(8765..9022)
DNA (258bp) protein (86aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_scaffold_5465_11
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(9172..10245)
DNA (1074bp) protein (358aa)
tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase (EC:2.1.1.61); K00566 tRNA-specific 2-thiouridylase [EC:2.8.1.-] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase (EC:2.1.1.61)
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CG93_THET1
13_1_40cm_scaffold_5465_12
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(10242..10553)
DNA (312bp) protein (104aa)
nifU-1; NifU protein; K04488 nitrogen fixation protein NifU and related proteins Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_scaffold_5465_13
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(10550..11269)
DNA (720bp) protein (240aa)
cysteine desulfurase NifS (EC:2.8.1.7); K04487 cysteine desulfurase [EC:2.8.1.7] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
iscS; cysteine desulfurase (EC:2.8.1.7)
Cysteine desulfurase n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3AA22_CARHZ
13_1_40cm_scaffold_5465_14
unknown

Not on your lists

11551..11733
DNA (183bp) protein (61aa)

This feature has no annotations

13_1_40cm_scaffold_5465_15
unknown

Not on your lists

11730..12629
DNA (900bp) protein (300aa)

This feature has no annotations

13_1_40cm_scaffold_5465_16
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(12610..13443)
DNA (834bp) protein (278aa)
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12); K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Aspartate--tRNA ligase id=3751776 bin=GWA2_Deltaproteo_65_63 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
aspartyl-tRNA synthetase
Displaying 16 items

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