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13_1_40cm_scaffold_5666

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_5666_1
Mycobacterium tuberculosis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..587)
DNA (585bp) protein (195aa)
ATPase {ECO:0000313|EMBL:CRF28869.1}; EC=3.6.3.- {ECO:0000313|EMBL:CRF28869.1};; TaxID=1773 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tubercu
ATPase associated with various cellular activities AAA_3 n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CHF3_THET1
ATPase AAA
13_1_40cm_scaffold_5666_2
unknown

Not on your lists

comp(584..1420)
DNA (837bp) protein (279aa)

This feature has no annotations

13_1_40cm_scaffold_5666_3
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(1460..2299)
DNA (840bp) protein (280aa)
PHP domain protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EIM5_9CHLR
PHP domain-containing protein; K07053 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
PHP domain-containing protein
13_1_40cm_scaffold_5666_4
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(2287..3060)
DNA (774bp) protein (258aa)
Putative uncharacterized protein n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CHC9_DESK7
hypothetical protein; K09769 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein
13_1_40cm_scaffold_5666_5
unknown

Not on your lists

comp(3068..4303)
DNA (1236bp) protein (412aa)

This feature has no annotations

13_1_40cm_scaffold_5666_6
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(4399..5931)
DNA (1533bp) protein (511aa)
metal dependent phosphohydrolase (EC:3.1.4.16); K06950 uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
metal dependent phosphohydrolase (EC:3.1.4.16)
ribonuclease n=1 Tax=Desulfurispora thermophila RepID=UPI00036883F6
13_1_40cm_scaffold_5666_7
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

6124..6438
DNA (315bp) protein (105aa)
Putative pterin-4-alpha-carbinolamine dehydratase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=PHS_THERP
pterin-4a-carbinolamine dehydratase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
putative pterin-4-alpha-carbinolamine dehydratase
13_1_40cm_scaffold_5666_8
unknown

Not on your lists

6503..6979
DNA (477bp) protein (159aa)

This feature has no annotations

13_1_40cm_scaffold_5666_9
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(6993..7475)
DNA (483bp) protein (161aa)
Regulatory protein RecX n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I328_CALAS
recX; regulatory protein RecX; K03565 regulatory protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
recX; regulatory protein RecX
13_1_40cm_scaffold_5666_10
Tepidanaerobacter acetatoxydans, Tepidanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(7462..8580)
DNA (1119bp) protein (373aa)
Protein RecA n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LUA7_TEPAE
recombinase A
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=1209989 species="Bacteria; Firmicut
13_1_40cm_scaffold_5666_11
unknown

Not on your lists

comp(8577..8735)
DNA (159bp) protein (53aa)

This feature has no annotations

13_1_40cm_scaffold_5666_12
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

8787..9371
DNA (585bp) protein (195aa)
ATP/cobalamin adenosyltransferase (EC:2.5.1.17) Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
ATP/cobalamin adenosyltransferase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6THH5_9CHLR
ATP/cobalamin adenosyltransferase
13_1_40cm_scaffold_5666_13
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9368..10198
DNA (831bp) protein (277aa)
aminoglycoside/hydroxyurea antibiotic resistance kinase (EC:2.7.1.72)
Aminoglycoside/hydroxyurea antibiotic resistance kinase n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0LB82_9ACTO
Streptomycin 6-kinase {ECO:0000313|EMBL:EWM67768.1}; TaxID=457406 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
13_1_40cm_scaffold_5666_14
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(10203..10523)
DNA (321bp) protein (107aa)
Serine O-acetyltransferase n=1 Tax=uncultured Chloroflexi bacterium RepID=H5SPH3_9CHLR id=5223952 bin=16ft_combo_ws3_JS1 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein
13_1_40cm_scaffold_5666_15
RBG_16_Chloroflexi_48_7_curated, Chloroflexi, Bacteria

Not on your lists

comp(10535..10762)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6ZY77_MELRP
hypothetical protein Tax=RBG_16_Chloroflexi_48_7_curated
hypothetical protein
13_1_40cm_scaffold_5666_16
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

comp(10777..11805)
DNA (1029bp) protein (343aa)
Glucose sorbosone dehydrogenase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SPQ4_9BACT
Glucose sorbosone dehydrogenase {ECO:0000313|EMBL:BAL58140.1}; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
glucose/sorbosone dehydrogenase
13_1_40cm_scaffold_5666_17
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12048..12797)
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI0003827715
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase Tax=RBG_16_Gamma2_60_9_curated
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
13_1_40cm_scaffold_5666_18
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(12794..13852)
DNA (1059bp) protein (353aa)
ruvB; Holliday junction DNA helicase RuvB (EC:3.1.22.4); K03551 holliday junction DNA helicase RuvB [EC:3.6.4.12] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=RUVB_ROSCS
ruvB; Holliday junction DNA helicase RuvB
13_1_40cm_scaffold_5666_19
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists


comp(13840..14802)
DNA (963bp) protein (321aa)
prolyl-tRNA synthetase; K01881 prolyl-tRNA synthetase [EC:6.1.1.15] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Proline--tRNA ligase n=2 Tax=Geobacter sulfurreducens RepID=SYP_GEOSL
proS; prolyl-tRNA ligase
13_1_40cm_scaffold_5666_20
unknown

Not on your lists

15081..15467
DNA (387bp) protein (129aa)

This feature has no annotations

13_1_40cm_scaffold_5666_21
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15735..15857
DNA (123bp) protein (41aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XXW9_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP36755.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
13_1_40cm_scaffold_5666_22
Streptomyces sp. C, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15909..16136
DNA (228bp) protein (76aa)
Predicted protein n=1 Tax=Streptomyces sp. C RepID=D9W2X5_9ACTO
Predicted protein {ECO:0000313|EMBL:EFL16269.1}; TaxID=253839 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. C.;"
Phage-like element PBSX protein xkdP
13_1_40cm_scaffold_5666_23
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(16143..16901)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VUC5_9ACTO
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein
13_1_40cm_scaffold_5666_24
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(16876..18210)
DNA (1335bp) protein (445aa)
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1); K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L0I8_THERP
Displaying 24 items

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