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13_1_40cm_scaffold_5785

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_5785_1
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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2..460
-----------------
DNA (459bp)
protein (153aa)
tRNA pseudouridine synthase A; K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
tRNA pseudouridine synthase A (EC:5.4.99.12); K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] id=24474130 bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
tRNA pseudouridine synthase A
13_1_40cm_scaffold_5785_2
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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464..904
-----------------
DNA (441bp)
protein (147aa)
rplM; 50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
rplM; 50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 id=14629519 bin=bin8_Chloro species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
rplM; 50S ribosomal protein L13
13_1_40cm_scaffold_5785_3
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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901..1296
-----------------
DNA (396bp)
protein (132aa)
30S ribosomal protein S9; K02996 small subunit ribosomal protein S9 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
30S ribosomal protein S9; K02996 small subunit ribosomal protein S9 id=14629518 bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin8_Chloro organism_group=Chloroflexi
30S ribosomal protein S9
13_1_40cm_scaffold_5785_4
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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1330..2481
-----------------
DNA (1152bp)
protein (384aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_scaffold_5785_5
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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2481..3323
-----------------
DNA (843bp)
protein (281aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Putative uncharacterized protein id=4424657 bin=GWC2_Chloroflexi_73_18 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
13_1_40cm_scaffold_5785_6
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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3393..4667
-----------------
DNA (1275bp)
protein (425aa)
YbbR family protein n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WS90_KYRT2
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein
13_1_40cm_scaffold_5785_7
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

4679..6007
-----------------
DNA (1329bp)
protein (443aa)
glmM; phosphoglucosamine mutase; K03431 phosphoglucosamine mutase [EC:5.4.2.10] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WS91_KYRT2
13_1_40cm_scaffold_5785_8
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

6056..7900
-----------------
DNA (1845bp)
protein (615aa)
glmS; glucosamine--fructose-6-phosphate aminotransferase (EC:2.6.1.16); K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_cur
glutamine--fructose-6-phosphate transaminase (EC:2.6.1.16)
glutamine amidotransferase n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035FE553
13_1_40cm_scaffold_5785_9
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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8060..8428
-----------------
DNA (369bp)
protein (123aa)
acpS; 4'-phosphopantetheinyl transferase (EC:2.7.8.7) Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
acpS; holo-ACP synthase (EC:2.7.8.7); K00997 holo-[acyl-carrier protein] synthase [EC:2.7.8.7] id=14629511 bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin8_Chloro organism_group=Chloroflexi
acpS; 4'-phosphopantetheinyl transferase (EC:2.7.8.7)
13_1_40cm_scaffold_5785_10
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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8758..9321
-----------------
DNA (564bp)
protein (188aa)
ADP-dependent (S)-NAD(P)H-hydrate dehydratase n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6H9G5_9FIRM
carbohydrate kinase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
carbohydrate kinase
13_1_40cm_scaffold_5785_11
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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9318..10490
-----------------
DNA (1173bp)
protein (391aa)
alanine racemase (EC:5.1.1.1); K01775 alanine racemase [EC:5.1.1.1] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
alanine racemase (EC:5.1.1.1)
Alanine racemase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6P0F6_9FIRM
13_1_40cm_scaffold_5785_12
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

10487..12358
-----------------
DNA (1872bp)
protein (624aa)
Putative uncharacterized protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UTP6_ROSS1
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein
13_1_40cm_scaffold_5785_13
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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12355..13266
-----------------
DNA (912bp)
protein (304aa)
UTP-glucose-1-phosphate uridylyltransferase; K00963 UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
UDP-glucose pyrophosphorylase (EC:2.7.7.9)
UDP-glucose pyrophosphorylase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PZC8_9FIRM
13_1_40cm_scaffold_5785_14
CG_CPR16-01, CG_CPR16, Bacteria

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13364..14401
-----------------
DNA (1038bp)
protein (346aa)
transglycosylase (EC:3.2.-.-)
Putative uncharacterized protein n=1 Tax=Arthrobacter globiformis NBRC 12137 RepID=H0QLB0_ARTGO
g5 domain transglycosylase Tax=CG_CPR16-01
13_1_40cm_scaffold_5785_15
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists


14421..14717
-----------------
DNA (297bp)
protein (99aa)
ksgA; dimethyladenosine transferase (EC:2.1.1.-); K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Selenomonas sp. oral taxon 892 str. F0426 RepID=U2M2C2_9FIRM
dimethyladenosine transferase
Displaying 15 items

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