ggKbase home page

13_1_40cm_scaffold_10012

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_10012_1
unknown

Not on your lists

1..144
DNA (144bp) protein (48aa)

This feature has no annotations

13_1_40cm_scaffold_10012_2
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(141..1694)
DNA (1554bp) protein (518aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CIC9_THET1
putative drug transport protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
EmrB/QacA subfamily drug resistance transporter
13_1_40cm_scaffold_10012_3
Nocardioidaceae bacterium Broad-1, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1684..2163)
DNA (480bp) protein (160aa)
Transcriptional regulator, MarR family n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9V1J1_9ACTO
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EGD40798.1}; TaxID=408672 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.
MarR family transcriptional regulator
13_1_40cm_scaffold_10012_4
unknown

Not on your lists

comp(2273..2578)
DNA (306bp) protein (102aa)

This feature has no annotations

13_1_40cm_scaffold_10012_5
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(2620..3150)
DNA (531bp) protein (177aa)
Putative membrane protein n=1 Tax=Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200) RepID=L0A2U0_DEIPD
hypothetical protein Tax=RBG_16_RIF_CHLX_69_14_curated
hypothetical protein
13_1_40cm_scaffold_10012_6
Deinococcus gobiensis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

3243..3617
DNA (375bp) protein (125aa)
Biphenyl-2,3-diol 1,2-dioxygenase III-related protein n=1 Tax=Deinococcus gobiensis (strain DSM 21396 / JCM 16679 / CGMCC 1.7299 / I-0) RepID=H8GSE3_DEIGI
Biphenyl-2,3-diol 1,2-dioxygenase III-related protein
Biphenyl-2,3-diol 1,2-dioxygenase III-related protein {ECO:0000313|EMBL:AFD25216.1}; TaxID=745776 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" sour
13_1_40cm_scaffold_10012_7
unknown

Not on your lists

comp(3614..4321)
DNA (708bp) protein (236aa)

This feature has no annotations

13_1_40cm_scaffold_10012_8
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(4397..4780)
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Streptomyces chartreusis RepID=UPI000262FE91
hypothetical protein Tax=RBG_16_Chloroflexi_57_11_curated
hypothetical protein
13_1_40cm_scaffold_10012_9
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

6430..7188
DNA (759bp) protein (253aa)
Lipolytic protein G-D-S-L family n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TMY5_9CHLR
Lipolytic protein G-D-S-L family Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_scaffold_10012_10
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(7185..8408)
DNA (1224bp) protein (408aa)
Major facilitator superfamily MFS_1 n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NI30_ROSCS
major facilitator transporter Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
major facilitator transporter
13_1_40cm_scaffold_10012_11
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(8469..9380)
DNA (912bp) protein (304aa)
Jag protein homolog n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6TWR2_9FIRM
Predicted RNA-binding protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Predicted RNA-binding protein
13_1_40cm_scaffold_10012_12
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(9377..10237)
DNA (861bp) protein (287aa)
hypothetical protein; K03217 preprotein translocase subunit YidC Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Membrane protein insertase, YidC/Oxa1 family id=4015861 bin=GWC2_Chloroflexi_73_18 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
13_1_40cm_scaffold_10012_13
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(10237..10461)
DNA (225bp) protein (75aa)
Putative membrane protein insertion efficiency factor n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q0V8_9FIRM
hypothetical protein; K08998 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein
13_1_40cm_scaffold_10012_14
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

11111..11488
DNA (378bp) protein (126aa)
dnaA; chromosome replication initiator DnaA; K02313 chromosomal replication initiator protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
chromosomal replication initiator protein DnaA; K02313 chromosomal replication initiator protein id=14628236 bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin8_Chloro organism_group=Chloroflexi
chromosomal replication initiator protein DnaA
Displaying 14 items

View Taxonomy