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13_1_40cm_scaffold_12309

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_12309_1
unknown

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comp(2..1033)
DNA (1032bp) protein (344aa)

This feature has no annotations

13_1_40cm_scaffold_12309_2
CSP1_5_NC10, NC10, Bacteria

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1346..2053
DNA (708bp) protein (236aa)
GntR family transcriptional regulator; K05799 GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex id=14430420 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
GntR family transcriptional regulator; K05799 GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex Tax=CSP1_5_NC10
GntR family transcriptional regulator
13_1_40cm_scaffold_12309_3
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

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2050..3198
DNA (1149bp) protein (383aa)
2-oxoacid:acceptor oxidoreductase subunit delta id=14632109 bin=bin9_gal15 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin9_gal15 organism_group=GAL15
2-oxoacid:acceptor oxidoreductase subunit delta Tax=CSP1_3_Armatimonadetes
2-oxoacid:acceptor oxidoreductase subunit delta
13_1_40cm_scaffold_12309_4
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

3199..4428
DNA (1230bp) protein (410aa)
pyruvate ferredoxin oxidoreductase subunit alpha (EC:1.2.7.1)
Pyruvate ferredoxin oxidoreductase, alpha subunit {ECO:0000313|EMBL:ABG03887.1}; EC=1.2.7.1 {ECO:0000313|EMBL:ABG03887.1};; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacteral
Pyruvate ferredoxin oxidoreductase, alpha subunit n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AXJ1_RUBXD
13_1_40cm_scaffold_12309_5
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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4439..5329
DNA (891bp) protein (297aa)
pyruvate ferredoxin oxidoreductase subunit beta; K00170 pyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.1] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
pyruvate ferredoxin oxidoreductase subunit beta; K00170 pyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.1] id=24466814 bin=RBG_19FT_COMBO_GAL15_69_19 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
pyruvate ferredoxin oxidoreductase subunit beta (EC:1.2.7.1)
13_1_40cm_scaffold_12309_6
unknown

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5299..5556
DNA (258bp) protein (86aa)

This feature has no annotations

13_1_40cm_scaffold_12309_7
unknown

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5571..5966
DNA (396bp) protein (132aa)

This feature has no annotations

13_1_40cm_scaffold_12309_8
unknown

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6049..6687
DNA (639bp) protein (213aa)

This feature has no annotations

13_1_40cm_scaffold_12309_9
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(6684..7211)
DNA (528bp) protein (176aa)
30S ribosomal protein S18 n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6THA3_9CHLR
rpsR; 30S ribosomal protein S18
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter
13_1_40cm_scaffold_12309_10
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(7221..7646)
DNA (426bp) protein (142aa)
Single-stranded DNA-binding protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EDL5_9CHLR
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaer
single-stranded DNA binding protein
13_1_40cm_scaffold_12309_11
Caldalkalibacillus thermarum, Caldalkalibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(7651..7920)
DNA (270bp) protein (90aa)
30S ribosomal protein S6 n=1 Tax=Caldalkalibacillus thermarum TA2.A1 RepID=F5L8F7_9BACI
30S ribosomal protein S6
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=986075 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Caldalkalibacillus.;" source="Caldalkalibacillus thermarum TA2
13_1_40cm_scaffold_12309_12
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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7929..8705
DNA (777bp) protein (259aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6SG15_INTC7
Cupin {ECO:0000313|EMBL:EWT04128.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
cupin
13_1_40cm_scaffold_12309_13
unknown

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8717..9478
DNA (762bp) protein (254aa)

This feature has no annotations

13_1_40cm_scaffold_12309_trna_1
unknown

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comp(9488..9573)
DNA (86bp)
transferRNA
13_1_40cm_scaffold_12309_14
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(9596..9970)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E7Y8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EHN10186.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter me
hypothetical protein
13_1_40cm_scaffold_12309_15
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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10112..11269
DNA (1158bp) protein (386aa)
NAD(P)H-nitrite reductase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q3L3_9FIRM
NAD(P)H-nitrite reductase {ECO:0000313|EMBL:EKP95674.1}; TaxID=867903 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Th
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
13_1_40cm_scaffold_12309_16
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

11266..11865
DNA (600bp) protein (200aa)
putative N-acetyltransferase id=1245772 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
putative N-acetyltransferase Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
putative N-acetyltransferase
13_1_40cm_scaffold_12309_17
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

11865..12533
DNA (669bp) protein (223aa)
Alpha/beta hydrolase family protein id=4034153 bin=GWA2_Methylomirabilis_73_35 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_scaffold_12309_18
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12741..13742)
DNA (1002bp) protein (334aa)
hypothetical protein n=1 Tax=Mastigocladopsis repens RepID=UPI0002E0B5EA
2-nitropropane dioxygenase {ECO:0000313|EMBL:ELZ13036.1}; TaxID=1227489 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena thermotoleran
2-nitropropane dioxygenase
13_1_40cm_scaffold_12309_19
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

13747..14100
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CGK6_THET1
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein
13_1_40cm_scaffold_12309_20
Knoellia aerolata, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14102..14566)
DNA (465bp) protein (155aa)
Transcriptional regulator, effector-binding domain/component n=1 Tax=Arthrobacter sp. SJCon RepID=L8TXQ1_9MICC
MerR family transcriptional regulator {ECO:0000313|EMBL:KGN40118.1}; TaxID=1385519 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia aerolata DSM 18566
transcription activator effector binding protein
13_1_40cm_scaffold_12309_21
Thermus filiformis, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(14563..15042)
DNA (480bp) protein (160aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01032}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01032};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; Isopropylmalate is
Homoaconitase small subunit n=1 Tax=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) RepID=HACB_THET2
homoaconitate hydratase small subunit
13_1_40cm_scaffold_12309_22
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(15203..16570)
DNA (1368bp) protein (456aa)
hacA; homoaconitase, large subunit (EC:4.2.1.36); K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
3-isopropylmalate dehydratase large subunit n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7A8X0_THEAQ
3-isopropylmalate dehydratase large subunit
13_1_40cm_scaffold_12309_23
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(16563..17045)
DNA (483bp) protein (161aa)
putative 2-isopropylmalate synthase; K01655 homocitrate synthase [EC:2.3.3.14] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Homocitrate synthase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HCZ9_ANADF
homocitrate synthase
Displaying 24 items

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