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13_1_40cm_scaffold_4020_3

Organism: 13_1_40CM_Chloroflexi_67_9

partial RP 16 / 55 BSCG 14 / 51 MC: 1 ASCG 5 / 38 MC: 1
Location: comp(1839..2708)

Top 3 Functional Annotations

Value Algorithm Source
sen:SACE_1934 RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=1247227 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi similarity UNIREF
DB: UNIREF100
  • Identity: 73.9
  • Coverage: 287.0
  • Bit_score: 416
  • Evalue 2.20e-113
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EFH82822.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" sou similarity UNIPROT
DB: UniProtKB
  • Identity: 68.1
  • Coverage: 288.0
  • Bit_score: 383
  • Evalue 3.70e-103
rpoE; RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 67.0
  • Coverage: 294.0
  • Bit_score: 378
  • Evalue 1.40e-102

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Taxonomy

Ktedonobacter racemifer → Ktedonobacter → Ktedonobacterales → Ktedonobacteria → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 870
ATGAGCGAGCGTGAATGGCTGGCGGAGCGGTTCGAGGCCAACCGGACCCACCTGCGAGCGGTGGCCCACCGGATGCTTGGTTCCCTGAGCGAGGCGGACGATGCCGTACAGGAAGCCTGGCTCCGGCTCAGCCGCTCGGACGCGAGCGAGGTCGCGAACCTGGGCGGGTGGCTGACGACGGTCGTCGGCCGGGTGTGCCTGGACATGCTGCGATCGCGCAAATCGCGACGCGAGGAGTCGCTCGACGCCCAGGCGCCCGACCCGATCGAGAGCCACGAAGCCGGAGTCGACCCCGAGCACCAAGCGGTCCTCGCCGACTCGGTCGGTCTCGCGCTGCTCGTGGTGCTCGAAACGCTGGCTCCCGCCGAGCGAGTCGCCTTCGTGCTGCACGACATGTTCGACCTGCCCTTCGACGAGATCGCTCCAATCCTGGGACGCTCACCCACCGCGGCACGACAGCTCGCGAGCCGGGCCCGCCGCCGGGTGCAGGGCGCGGCATTGGTGTCCGAGCCCGATCTTCCGCGCCAGCGAAAAGTGGTCGATGCGTTCCTCGCCGCATCGCGCGGCGGTGACTTCGAGGCGCTCCTCGCGGTCCTCGATCCGGAGGTCGTGCTCCGAGCCGACCGCGCAGCCGTGCAAATCGGCGCATCCGGCGAGGTCCGCGGCGCGGCGGCCGTGGCCCGCACCTTCGCCGGGCGCGCCAAGGAGGCACAGCCGGCGCTCATCGATGGCGCCGCGGGCCTCGTGTGGGCTCCAGGGGGACGGCCGCGCGTCGTATTCGGATTCACGATCGAACAGGGGAAGATCGTCGCGATAGACATGATCGCCGACCGCGAGGGTCTTGGTCAGCTAGACATCGCGATTCTCTAA
PROTEIN sequence
Length: 290
MSEREWLAERFEANRTHLRAVAHRMLGSLSEADDAVQEAWLRLSRSDASEVANLGGWLTTVVGRVCLDMLRSRKSRREESLDAQAPDPIESHEAGVDPEHQAVLADSVGLALLVVLETLAPAERVAFVLHDMFDLPFDEIAPILGRSPTAARQLASRARRRVQGAALVSEPDLPRQRKVVDAFLAASRGGDFEALLAVLDPEVVLRADRAAVQIGASGEVRGAAAVARTFAGRAKEAQPALIDGAAGLVWAPGGRPRVVFGFTIEQGKIVAIDMIADREGLGQLDIAIL*