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13_1_40cm_scaffold_1991

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_1991_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(3..1220)
DNA (1218bp) protein (406aa)
ftsH; ATP-dependent protease FtsH (EC:3.4.24.-); K03798 cell division protease FtsH [EC:3.4.24.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A875_GEMAT
peptidase M41 FtsH domain protein
13_1_40cm_scaffold_1991_2
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(1221..1775)
DNA (555bp) protein (185aa)
hpt; hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:BAH38434.1}; EC=2.4.2.8 {ECO:0000313|EMBL:BAH38434.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae;
Hypoxanthine phosphoribosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A874_GEMAT
13_1_40cm_scaffold_1991_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1732..3111)
DNA (1380bp) protein (460aa)
cell cycle protein; K04075 tRNA(Ile)-lysidine synthase [EC:6.3.4.19] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
tRNA(Ile)-lysidine synthase id=4232765 bin=GWC2_Methylomirabilis_70_16 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
tRNA(Ile) lysidine-34 synthase
13_1_40cm_scaffold_1991_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

3124..3723
DNA (600bp) protein (200aa)
flavin reductase-like domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein id=14424636 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
flavin reductase domain-containing protein
13_1_40cm_scaffold_1991_5
unknown

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comp(3777..4298)
DNA (522bp) protein (174aa)

This feature has no annotations

13_1_40cm_scaffold_1991_trna_1
unknown

Not on your lists

comp(4496..4570)
DNA (75bp)
transferRNA
13_1_40cm_scaffold_1991_6

Not on your lists

comp(4582..7923)
DNA (3342bp) protein (1114aa)
Putative laccase (Fragment) n=1 Tax=uncultured bacterium RepID=D7R918_9BACT
Putative laccase {ECO:0000313|EMBL:ADH16187.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
amidohydrolase
13_1_40cm_scaffold_1991_7
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(7935..9143)
DNA (1209bp) protein (403aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6C5_GEMAT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
Ig domain protein group 1 domain protein
13_1_40cm_scaffold_1991_8
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(9155..9430)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7Y4_GEMAT
Septum formation initiator Tax=GWC2_Gemmatimonadetes_71_10_curated
Septum formation initiator
13_1_40cm_scaffold_1991_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(9427..9981)
DNA (555bp) protein (185aa)
eno; enolase (EC:4.2.1.11); K01689 enolase [EC:4.2.1.11] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Enolase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SFW5_9BACT
Enolase
13_1_40cm_scaffold_1991_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(9956..10630)
DNA (675bp) protein (225aa)
eno; enolase (EC:4.2.1.11); K01689 enolase [EC:4.2.1.11] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Enolase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=ENO_GEMAT
Enolase
13_1_40cm_scaffold_1991_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10644..11363)
DNA (720bp) protein (240aa)
acyltransferase; K00655 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] Tax=RBG_16_Gemmatimonadetes_66_8_curated
1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NGR9_DESAR
1-acyl-sn-glycerol-3-phosphate acyltransferase
13_1_40cm_scaffold_1991_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(11360..12322)
DNA (963bp) protein (321aa)
Thiamine-monophosphate kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7Y1_GEMAT
thiamine-monophosphate kinase
Thiamine-monophosphate kinase {ECO:0000313|EMBL:AHG90546.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_1991_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(12336..13646)
DNA (1311bp) protein (437aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IHZ2_ANADE
carbohydrate kinase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
NAD(P)H-hydrate epimerase
13_1_40cm_scaffold_1991_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(13800..14450)
DNA (651bp) protein (217aa)
MEMO1 family protein AnaeK_1254 n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UI82_ANASK
hypothetical protein; K06990 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_scaffold_1991_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(14630..15025)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7X8_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Verrucomicrobia/Planctomycetes-restricted protein
13_1_40cm_scaffold_1991_16
Thermodesulfatator indicus, Thermodesulfatator, Thermodesulfobacteriales, Thermodesulfobacteria, Thermodesulfobacteria, Bacteria

Not on your lists

comp(15081..17393)
DNA (2313bp) protein (771aa)
ATP-dependent protease La (EC:3.4.21.53)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HA
Lon protease n=1 Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8AA04_THEID
13_1_40cm_scaffold_1991_17
Leptospirillum sp. Group II '5-way CG', Leptospirillum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(17393..17851)
DNA (459bp) protein (153aa)
Small heat shock protein n=4 Tax=Leptospirillum RepID=J9ZEJ6_LEPFM
heat-shock protein Hsp20
Putative heat shock protein (Hsp20) {ECO:0000313|EMBL:EDZ38085.1}; TaxID=419541 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Leptospirillum.;" source="Leptospirillum sp. Group II '5-
13_1_40cm_scaffold_1991_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(17913..19235)
DNA (1323bp) protein (441aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAW2_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG89288.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_1991_19
unknown

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comp(19315..21285)
DNA (1971bp) protein (657aa)

This feature has no annotations

13_1_40cm_scaffold_1991_20
unknown

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comp(21298..21471)
DNA (174bp) protein (58aa)

This feature has no annotations

13_1_40cm_scaffold_1991_21
RIFOXYA2_FULL_Elusimicrobia_69_6_curated, Elusimicrobia, Bacteria

Not on your lists

21502..22143
DNA (642bp) protein (214aa)
peptidyl-prolyl cis-trans isomerase PpiA precursor (EC:5.2.1.8)
cyclophilin type peptidyl-prolyl cis-trans isomerase Tax=RIFOXYA2_FULL_Elusimicrobia_69_6_curated
Peptidyl-prolyl cis-trans isomerase, cyclophilin type id=2319562 bin=GWA2_Elusimicrobia_66_18 species=Planctomyces maris genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
13_1_40cm_scaffold_1991_22
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(22130..22879)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S6Y6_PEDSD id=5223268 bin=16ft_combo_ws3_JS1 species=Pedobacter saltans genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
photosynthetic reaction centre cytochrome c subunit
Photosynthetic reaction centre cytochrome c subunit {ECO:0000313|EMBL:AHG88272.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_1991_23
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22915..23703)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CW43_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26457.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
13_1_40cm_scaffold_1991_24
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(23737..24351)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CGU6_THET1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ42967.1}; Flags: Precursor;; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
13_1_40cm_scaffold_1991_25
unknown

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comp(24371..24973)
DNA (603bp) protein (201aa)

This feature has no annotations

13_1_40cm_scaffold_1991_26
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(25137..26006)
DNA (870bp) protein (290aa)
Lysyl oxidase-like n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F709_SORC5
Lysyl oxidase
Lysyl oxidase {ECO:0000313|EMBL:AHG92636.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_1991_27
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(26107..26490)
DNA (384bp) protein (128aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IT11_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG88851.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_1991_28
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(26529..27140)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EIE0_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CCF84452.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source
hypothetical protein
13_1_40cm_scaffold_1991_29
unknown

Not on your lists

27199..27921
DNA (723bp) protein (241aa)

This feature has no annotations

Displaying items 1-30 of 52 in total

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