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13_1_40cm_scaffold_21807

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_21807_1
Anabaena cylindrica, Anabaena, Nostocales, Cyanobacteria, Bacteria

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1..930
DNA (930bp) protein (310aa)
Tyrosine decarboxylase (EC:4.1.1.25)
Tyrosine decarboxylase {ECO:0000313|EMBL:AFZ60767.1}; EC=4.1.1.25 {ECO:0000313|EMBL:AFZ60767.1};; TaxID=272123 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Anabaena.;" source="Anabaena c
Tyrosine decarboxylase n=1 Tax=Anabaena cylindrica (strain ATCC 27899 / PCC 7122) RepID=K9ZQF9_ANACC
13_1_40cm_scaffold_21807_2
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(927..3086)
DNA (2160bp) protein (720aa)
TonB-dependent receptor n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SKR1_RHOMR
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:AEN73909.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
13_1_40cm_scaffold_21807_3
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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3149..4342
DNA (1194bp) protein (398aa)
Predicted membrane protein n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2SN04_HAHCH id=5223413 bin=16ft_combo_ws3_JS1 species=Hahella chejuensis genus=Hahella taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein Tax=RBG_16_RIF_WS3X_71_46_curated
Hypothetical protein
13_1_40cm_scaffold_21807_4
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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comp(4339..5907)
DNA (1569bp) protein (523aa)
Amidase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MX51_CORCM
gatA2; amidase Tax=RBG_13_Acidobacteria_68_16_curated
gatA2; amidase
13_1_40cm_scaffold_21807_5
CSP1_5_NC10, NC10, Bacteria

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6096..6440
DNA (345bp) protein (115aa)
diguanylate cyclase id=14428813 bin=bin3_NC10 species=Nitrosospira sp. APG3 genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
diguanylate cyclase Tax=CSP1_5_NC10
13_1_40cm_scaffold_21807_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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6500..7642
DNA (1143bp) protein (381aa)
diguanylate cyclase Tax=RBG_16_Gemmatimonadetes_66_8_curated
diguanylate cyclase id=14428813 bin=bin3_NC10 species=Nitrosospira sp. APG3 genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
diguanylate cyclase
13_1_40cm_scaffold_21807_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(7653..8393)
DNA (741bp) protein (247aa)
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein id=14428812 bin=bin3_NC10 species=Nitrosospira sp. APG3 genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
13_1_40cm_scaffold_21807_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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8561..8737
DNA (177bp) protein (59aa)
30S ribosomal protein S21 n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0F18
30S ribosomal protein S21 Tax=RBG_16_Gemmatimonadetes_66_8_curated
30S ribosomal protein S21
13_1_40cm_scaffold_21807_9

Not on your lists

8791..8910
DNA (120bp) protein (40aa)
Uncharacterized protein {ECO:0000313|EMBL:EKD37290.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Cold-shock DNA-binding protein family id=2113731 bin=GWB2_Desulfobacterales_56_26 species=Desulfobulbus propionicus genus=Desulfobulbus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
Cold-shock protein DNA-binding protein
13_1_40cm_scaffold_21807_10
unknown

Not on your lists

comp(8968..9168)
DNA (201bp) protein (67aa)

This feature has no annotations

13_1_40cm_scaffold_21807_11
RBG_13_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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9398..10081
DNA (684bp) protein (228aa)
two component LuxR family transcriptional regulator Tax=RBG_13_Ignavibacteria_36_8_curated
two-component system response regulator id=717628 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
LuxR family transcriptional regulator
13_1_40cm_scaffold_21807_12
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(10097..10651)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6B1_GEMAT
LemA family protein
Uncharacterized protein {ECO:0000313|EMBL:BAH37771.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
13_1_40cm_scaffold_21807_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(10648..11316)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6B0_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
Displaying 13 items

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