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13_1_40cm_scaffold_2509

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_2509_1
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..246
DNA (246bp) protein (82aa)
Uronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013440}; EC=5.3.1.12 {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013438};; Glucuronate isomerase {ECO:0000256|HA
Uronate isomerase n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0IEA2_9SPHN
Glucuronate isomerase
13_1_40cm_scaffold_2509_2
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(165..1175)
DNA (1011bp) protein (337aa)
glucuronate isomerase (EC:5.3.1.12)
Uronate isomerase {ECO:0000256|SAAS:SAAS00013440}; EC=5.3.1.12 {ECO:0000256|SAAS:SAAS00013438};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae;
Glucuronate isomerase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SJM9_RHOMR
13_1_40cm_scaffold_2509_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(1327..2643)
DNA (1317bp) protein (439aa)
Oxidoreductase domain protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L8A7_HALH1
oxidoreductase domain protein
Oxidoreductase domain protein {ECO:0000313|EMBL:AHG89161.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_2509_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(2640..3308)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DCB7_9BACT
protein of unknown function DUF1080
Uncharacterized protein {ECO:0000313|EMBL:AHG93132.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_2509_5
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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comp(3388..4629)
DNA (1242bp) protein (414aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI000364A9F1
hexuronate transporter; K08191 MFS transporter, ACS family, hexuronate transporter Tax=RBG_13_Acidobacteria_68_16_curated
major facilitator superfamily MFS_1
13_1_40cm_scaffold_2509_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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4663..5670
DNA (1008bp) protein (336aa)
Xylose isomerase domain protein TIM barrel n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0KFL5_9BACT
Xylose isomerase domain-containing protein TIM barrel
Xylose isomerase domain-containing protein TIM barrel {ECO:0000313|EMBL:AHG93156.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_2509_7
unknown

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5777..6094
DNA (318bp) protein (106aa)

This feature has no annotations

13_1_40cm_scaffold_2509_8
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(6556..7530)
DNA (975bp) protein (325aa)
PfkB domain-containing protein; K00874 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] id=12556857 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
PfkB domain-containing protein; K00874 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PfkB domain-containing protein
13_1_40cm_scaffold_2509_9
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

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comp(7527..8162)
DNA (636bp) protein (212aa)
2-dehydro-3-deoxyphosphogluconate aldolase; K01625 2-dehydro-3-deoxyphosphogluconate aldolase / 4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.16] Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curate
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI000364AA62
2-dehydro-3-deoxyphosphogluconate aldolase
13_1_40cm_scaffold_2509_10
Algoriphagus machipongonensis, Algoriphagus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(8155..8838)
DNA (684bp) protein (228aa)
altronate oxidoreductase (EC:1.1.1.58)
Altronate oxidoreductase n=1 Tax=Algoriphagus machipongonensis RepID=A3HWR4_9BACT
Altronate oxidoreductase {ECO:0000313|EMBL:EAZ81037.1}; TaxID=388413 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Algoriphagus.;" source="Algoriphagus machipongonensi
13_1_40cm_scaffold_2509_11
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(8802..9251)
DNA (450bp) protein (150aa)
Mannitol dehydrogenase domain protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y3U9_PEDHD
altronate oxidoreductase
Mannitol dehydrogenase domain protein {ECO:0000313|EMBL:ACU03378.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Ped
13_1_40cm_scaffold_2509_12
unknown

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9364..9681
DNA (318bp) protein (106aa)

This feature has no annotations

13_1_40cm_scaffold_2509_13
Capsaspora owczarzaki, Capsaspora, Ichthyosporea, Eukaryota

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comp(9668..10297)
DNA (630bp) protein (210aa)
Cutc protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) RepID=E9C7K6_CAPO3
Cutc protein {ECO:0000313|EMBL:KJE93441.1}; TaxID=595528 species="Eukaryota; Ichthyosporea; Capsaspora.;" source="Capsaspora owczarzaki (strain ATCC 30864).;"
copper homeostasis protein CutC
13_1_40cm_scaffold_2509_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

10347..10859
DNA (513bp) protein (171aa)
Methylated-DNA--protein-cysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; EC=2.1.1.63 {ECO:0000256|HAMAP-Rule:MF_00772};; 6-O-methylguanine-DNA methyltransferase {ECO:0000256|HAMAP-Rule:MF
methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Nevskia ramosa RepID=UPI0003B76409
Methylated-DNA--protein-cysteine methyltransferase
13_1_40cm_scaffold_2509_15
Smithella sp. SCADC, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10839..11219)
DNA (381bp) protein (127aa)
NUDIX hydrolase n=1 Tax=Geobacter sp. (strain M18) RepID=E8WRK6_GEOS8
Uncharacterized protein {ECO:0000313|EMBL:KFO66929.1}; TaxID=1499107 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. SCAD
NUDIX hydrolase
13_1_40cm_scaffold_2509_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(11279..11497)
DNA (219bp) protein (73aa)
infA; translation initiation factor IF-1; K02518 translation initiation factor IF-1 Tax=RBG_16_Gemmatimonadetes_66_8_curated
Translation initiation factor IF-1
translation initiation factor IF-1 id=4225919 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
13_1_40cm_scaffold_2509_17
R_Rokubacteria_69_13, Rokubacteria, Bacteria

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12014..12739
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036A4602
XRE family transcriptional regulator Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
XRE family transcriptional regulator
13_1_40cm_scaffold_2509_18
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

12785..14227
DNA (1443bp) protein (481aa)
ligB; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1] Tax=RBG_16_Actinobacteria_68_12_curated
ligB; ATP-dependent DNA ligase (EC:6.5.1.1)
Probable DNA ligase n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q8T3_CATAD
13_1_40cm_scaffold_2509_19
RBG_19FT_COMBO_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(14189..14956)
DNA (768bp) protein (256aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) RepID=B2J3Z8_NOSP7
short-chain dehydrogenase/reductase SDR Tax=RBG_19FT_COMBO_Deltaproteobacteria_52_11_curated
short-chain dehydrogenase/reductase SDR
13_1_40cm_scaffold_2509_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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14981..15469
DNA (489bp) protein (163aa)
Putative uncharacterized protein n=1 Tax=uncultured marine microorganism HF4000_APKG10H12 RepID=B3TC68_9ZZZZ
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Protein of unknown function DUF2911
13_1_40cm_scaffold_2509_21
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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15466..16014
DNA (549bp) protein (183aa)
hypothetical protein Tax=GWA2_Ignavibacteria_54_16_curated
Putative uncharacterized protein id=3122155 bin=GWC2_Elusimicrobia_64_44 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
hypothetical protein
13_1_40cm_scaffold_2509_22
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(15971..17275)
DNA (1305bp) protein (435aa)
pcrA; ATP-dependent DNA helicase PcrA (EC:3.6.1.-); K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12] Tax=GWC2_Gemmatimonadetes_71_10_curated
Exonuclease, DNA polymerase III, epsilon subunit family n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJ99_CHLTF
DNA polymerase III subunit epsilon family exonuclease
13_1_40cm_scaffold_2509_23
unknown

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17561..19285
DNA (1725bp) protein (575aa)

This feature has no annotations

13_1_40cm_scaffold_2509_24
BJP_IG2158_Zixibacteria_48_33, Zixibacteria, Bacteria

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19404..20819
DNA (1416bp) protein (472aa)
Uncharacterized protein n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LGR2_9BACT
transcriptional regulator CadC
Tax=BJP_IG2158_Zixibacteria_48_33
13_1_40cm_scaffold_2509_25
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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comp(20816..22132)
DNA (1317bp) protein (439aa)
Uncharacterized protein n=1 Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2R8A2_PIRSD
hypothetical protein Tax=RBG_16_Actinobacteria_67_10_curated
hypothetical protein
13_1_40cm_scaffold_2509_26
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

22156..24177
DNA (2022bp) protein (674aa)
PKD domain containing protein
DNA polymerase III subunit alpha Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
13_1_40cm_scaffold_2509_27
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(24178..25137)
DNA (960bp) protein (320aa)
Beta-lactamase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJA7_KORVE
beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:AHG93328.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_2509_28
R_Acidobacteria_68_18, Acidobacteria, Bacteria

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25448..26014
DNA (567bp) protein (189aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
Thioredoxin reductase n=1 Tax=Bacillus stratosphericus LAMA 585 RepID=M5QZ85_9BACI
hypothetical protein
Displaying 28 items

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