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13_1_40cm_scaffold_7002

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_7002_1
unknown

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2..133
DNA (132bp) protein (44aa)

This feature has no annotations

13_1_40cm_scaffold_7002_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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130..1122
DNA (993bp) protein (331aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_scaffold_7002_3
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(1184..1834)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PIZ7_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU60081.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source=
13_1_40cm_scaffold_7002_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(1844..2551)
DNA (708bp) protein (236aa)
Putative cytochrome c n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Z8_GEMAT
cytochrome c class I
Cytochrome c class I {ECO:0000313|EMBL:AHG89343.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_7002_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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2661..3935
DNA (1275bp) protein (425aa)
PBS lyase HEAT domain protein repeat-containing protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UU23_ROSS1
peptidase M56 BlaR1
Peptidase M56 BlaR1 {ECO:0000313|EMBL:AHG87780.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_7002_6
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(3925..5523)
DNA (1599bp) protein (533aa)
glpD; glycerol-3-phosphate dehydrogenase (EC:1.1.5.3); K00111 glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Glycerol-3-phosphate dehydrogenase n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CJP9_MYXFH
glycerol-3-phosphate dehydrogenase
13_1_40cm_scaffold_7002_7
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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5616..6875
DNA (1260bp) protein (420aa)
fadI; acetyl-CoA acyltransferase (EC:2.3.1.16); K00632 acetyl-CoA acyltransferase [EC:2.3.1.16] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
fadI; acetyl-CoA acyltransferase (EC:2.3.1.16)
Acetyl-CoA acyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABM2_GEMAT
13_1_40cm_scaffold_7002_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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6875..9034
DNA (2160bp) protein (720aa)
fadJ; multifunctional fatty acid oxidation complex subunit alpha; K01782 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] Tax=RIFCS
3-hydroxyacyl-CoA dehydrogenase NAD-binding n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UB30_ANASK
fadJ; multifunctional fatty acid oxidation complex subunit alpha
13_1_40cm_scaffold_7002_9
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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9034..9495
DNA (462bp) protein (154aa)
putative proline dehydrogenase (EC:1.5.99.8); K00318 proline dehydrogenase [EC:1.5.99.8] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Putative proline dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABL8_GEMAT
Proline dehydrogenase
13_1_40cm_scaffold_7002_10
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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9438..9905
DNA (468bp) protein (156aa)
putative proline dehydrogenase (EC:1.5.99.8)
Putative proline dehydrogenase {ECO:0000313|EMBL:BAH39895.1}; EC=1.5.5.2 {ECO:0000313|EMBL:BAH39895.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatim
Putative proline dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABL8_GEMAT
13_1_40cm_scaffold_7002_11
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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9920..10189
DNA (270bp) protein (90aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_scaffold_7002_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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10186..11100
DNA (915bp) protein (305aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RSGA_GEMAT
ribosome biogenesis GTPase RsgA
13_1_40cm_scaffold_7002_13
Peptococcaceae bacterium BRH_c4b, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11057..11371)
DNA (315bp) protein (105aa)
Predicted pyrophosphatase n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5CZ60_PELTS
Nucleotide pyrophosphohydrolase {ECO:0000313|EMBL:KJS15888.1}; TaxID=1629717 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c4b.;"
MazG; pyrophosphatase
13_1_40cm_scaffold_7002_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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11376..12617
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F366_CONWI
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_scaffold_7002_15
Desulfohalobium retbaense, Desulfohalobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(12594..13124)
DNA (531bp) protein (177aa)
Intracellular protease, PfpI family n=1 Tax=Desulfohalobium retbaense (strain DSM 5692) RepID=C8X3K0_DESRD
Pfpi family intracellular protease
Intracellular protease, PfpI family {ECO:0000313|EMBL:ACV68997.1}; TaxID=485915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfohalobiaceae; Desulfohalobium.;" sourc
13_1_40cm_scaffold_7002_16
unknown

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13241..13363
DNA (123bp) protein (41aa)

This feature has no annotations

Displaying 16 items

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