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13_1_40cm_scaffold_8172

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_8172_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(1..396)
DNA (396bp) protein (132aa)
Cyclic nucleotide-binding domain-containing protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MHI7_CORCM
cyclic nucleotide-binding domain-containing protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
cyclic nucleotide-binding domain-containing protein
13_1_40cm_scaffold_8172_2
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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433..963
DNA (531bp) protein (177aa)
pgsA2; CDP-alcohol phosphatidyltransferase; K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] Tax=GWC2_Gemmatimonadetes_71_10_curated
CDP-alcohol phosphatidyltransferase n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7URI6_MYXSD
CDP-alcohol phosphatidyltransferase
13_1_40cm_scaffold_8172_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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980..1504
DNA (525bp) protein (175aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_scaffold_8172_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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1645..1836
DNA (192bp) protein (64aa)
OsmC family protein n=1 Tax=uncultured bacterium RepID=L7Y6K5_9BACT
hypothetical protein; K07397 putative redox protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_scaffold_8172_5
unknown

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1829..2281
DNA (453bp) protein (151aa)

This feature has no annotations

13_1_40cm_scaffold_8172_6
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(2285..2530)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA48_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_40cm_scaffold_8172_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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2596..2895
DNA (300bp) protein (100aa)
hypothetical protein
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_scaffold_8172_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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2892..3518
DNA (627bp) protein (209aa)
putative oxidoreductase Tax=RBG_16_Gemmatimonadetes_66_8_curated
putative oxidoreductase
DSBA oxidoreductase id=5097429 bin=PER_GWF2_39_17 species=PER_GWE2_38_7 genus=PER_GWE2_38_7 taxon_order=PER_GWE2_38_7 taxon_class=PER_GWE2_38_7 phylum=PER tax=PER_GWF2_39_17 organism_group=PER (Peregrinibacteria)
13_1_40cm_scaffold_8172_9
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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3518..3988
DNA (471bp) protein (157aa)
Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67L97_SYMTH
VKOR family protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_40cm_scaffold_8172_10
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(3924..5870)
DNA (1947bp) protein (649aa)
acs; acetyl-coenzyme A synthetase (EC:6.2.1.1); K01895 acetyl-CoA synthetase [EC:6.2.1.1] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Acetyl-coenzyme A synthetase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=ACSA_GEMAT
Acetyl-coenzyme A synthetase
13_1_40cm_scaffold_8172_11
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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6038..6379
DNA (342bp) protein (114aa)
Anti-sigma factor antagonist n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FI22_DESAA
anti-sigma-factor antagonist
Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_scaffold_8172_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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6394..6750
DNA (357bp) protein (119aa)
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C1V3_DESTA id=5223401 bin=16ft_combo_ws3_JS1 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
two-component response regulator protein; K15012 two-component system, response regulator RegA Tax=RBG_16_Gemmatimonadetes_66_8_curated
two component sigma-54 specific Fis family transcriptional regulator
13_1_40cm_scaffold_8172_13
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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6737..7411
DNA (675bp) protein (225aa)
ccmA; putative heme exporter protein CcmA (EC:3.6.3.41)
heme ABC exporter, ATP-binding protein CcmA; K09687 antibiotic transport system ATP-binding protein Tax=GWC2_Gemmatimonadetes_71_10_curated
heme exporter protein CcmA id=24489893 bin=RBG_19FT_COMBO_GAL15_69_19 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
13_1_40cm_scaffold_8172_14
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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7398..8084
DNA (687bp) protein (229aa)
Heme exporter protein CcmB n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA42_GEMAT
ccmB; heme exporter protein CcmB; K02194 heme exporter protein B Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
cytochrome c-type biogenesis protein CcmB
13_1_40cm_scaffold_8172_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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8081..8695
DNA (615bp) protein (205aa)
Heme exporter protein C n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L1F8_THERP
ccmC; heme exporter protein CcmC; K02195 heme exporter protein C Tax=RBG_16_Gemmatimonadetes_66_8_curated
cytochrome c assembly protein
13_1_40cm_scaffold_8172_16
unknown

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8688..8798
DNA (111bp) protein (37aa)

This feature has no annotations

13_1_40cm_scaffold_8172_17
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8760..9356)
DNA (597bp) protein (199aa)
Tax=BJP_IG2102_Gammaproteobacteria_62_140
13_1_40cm_scaffold_8172_18
Aneurinibacillus aneurinilyticus, Aneurinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9414..9647
DNA (234bp) protein (78aa)
Uroporphyrinogen-III synthase n=1 Tax=Aneurinibacillus aneurinilyticus ATCC 12856 RepID=U1X9B8_ANEAE
Uroporphyrinogen-III synthase {ECO:0000313|EMBL:ERI11565.1}; TaxID=649747 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Aneurinibacillus group; Aneurinibacillus.;" source="Aneu
uroporphyrin-III C-methyltransferase
Displaying 18 items

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