ggKbase home page

13_1_40cm_scaffold_1112

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_1112_1
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(405..1553)
DNA (1149bp) protein (383aa)
UBA/THIF-type NAD/FAD binding protein n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UCF4_ANASK
UBA/THIF-type NAD/FAD binding protein
UBA/THIF-type NAD/FAD binding protein {ECO:0000313|EMBL:ACG74790.1}; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaerom
13_1_40cm_scaffold_1112_2
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1557..1832)
DNA (276bp) protein (92aa)
Molybdopterin synthase subunit MoaD n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IFA5_ANADE
sulfur transfer protein ThiS
Molybdopterin synthase subunit MoaD {ECO:0000313|EMBL:ABC83260.1}; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyx
13_1_40cm_scaffold_1112_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(1846..2799)
DNA (954bp) protein (318aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00080104}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|
thrB; homoserine kinase ThrB (EC:2.7.1.39) id=14631961 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin9_gal15 organism_group=GAL15
Homoserine kinase
13_1_40cm_scaffold_1112_4
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2796..4052)
DNA (1257bp) protein (419aa)
Threonine synthase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HGE0_ANADF
threonine synthase
Threonine synthase {ECO:0000313|EMBL:ABS27786.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source
13_1_40cm_scaffold_1112_5
R_OD1_Uhrbacteria_51_9, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

comp(4049..4957)
DNA (909bp) protein (303aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11); K00606 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] Tax=RIFCSPLOWO2_02_FULL_OD1_Uhrbacteria_51_9_curated
ketopantoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SS04_9BACT
13_1_40cm_scaffold_1112_6
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(4944..6173)
DNA (1230bp) protein (410aa)
aspartate aminotransferase (transaminase a) (aspat) (EC:2.6.1.1) id=14626843 bin=bin7_NC10_sister species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
aspartate aminotransferase (transaminase a) (aspat) (EC:2.6.1.1) Tax=CSP1_6_Rokubacteria
aspartate aminotransferase (transaminase a) (aspat) (EC:2.6.1.1)
13_1_40cm_scaffold_1112_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(6380..7879)
DNA (1500bp) protein (500aa)
Aldehyde dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7K0_GEMAT
Aldehyde Dehydrogenase
Aldehyde Dehydrogenase {ECO:0000313|EMBL:AHG90457.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_1112_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(7885..8343)
DNA (459bp) protein (153aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7J9_GEMAT
hypothetical membrane protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical membrane protein
13_1_40cm_scaffold_1112_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8762..9919
DNA (1158bp) protein (386aa)
Transcriptional regulatory protein containing a sigma-54 interaction domain n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8F6_SALRM
fhlA; transcriptional regulator
Transcriptional regulatory protein containing a sigma-54 interaction domain {ECO:0000313|EMBL:CBH24311.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodot
13_1_40cm_scaffold_1112_10
unknown

Not on your lists

comp(9733..10395)
DNA (663bp) protein (221aa)

This feature has no annotations

13_1_40cm_scaffold_1112_11

Not on your lists

comp(10379..10915)
DNA (537bp) protein (179aa)
2'-5' RNA ligase n=1 Tax=uncultured prokaryote RepID=H5SIR3_9ZZZZ
2'-5' RNA ligase {ECO:0000313|EMBL:BAL56049.1}; TaxID=198431 species="unclassified sequences; environmental samples.;" source="uncultured prokaryote.;"
ligT; 2'-5' RNA ligase
13_1_40cm_scaffold_1112_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10930..11721)
DNA (792bp) protein (264aa)
hypothetical protein; K06864 uncharacterized protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
Conserved hypothetical protein CHP00268
Putative uncharacterized protein id=4940111 bin=GWC2_Syntrophobacterales_56_13 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
13_1_40cm_scaffold_1112_13
Streptomyces sviceus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11880..12359
DNA (480bp) protein (160aa)
Transcriptional regulator, AsnC family n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P479_9BACT
AsnC-family transcriptional regulator {ECO:0000313|EMBL:EDY55089.1}; TaxID=463191 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sviceus A
AsnC family transcriptional regulator
13_1_40cm_scaffold_1112_14
RBG_19FT_COMBO_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

Not on your lists

12359..13837
DNA (1479bp) protein (493aa)
hypothetical membrane protein Tax=RBG_19FT_COMBO_Chloroflexi_50_10_curated
ial:IALB_2604 DMT superfamily drug/metabolite permease id=719043 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
protein of unknown function DUF6 transmembrane
13_1_40cm_scaffold_1112_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

13834..14211
DNA (378bp) protein (126aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Desulfovibrio sp. X2 RepID=S7VC87_9DELT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
conserved protein of unknown function
13_1_40cm_scaffold_1112_16
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

14177..14518
DNA (342bp) protein (114aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000382787F
ycdJ; arylesterase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
antibiotic biosynthesis monooxygenase
13_1_40cm_scaffold_1112_17
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

14586..14906
DNA (321bp) protein (107aa)
Putative Tyrosine decarboxylase 1 n=1 Tax=Streptomyces afghaniensis 772 RepID=S4M502_9ACTO
aromatic-L-amino-acid decarboxylase
Aromatic-L-amino-acid decarboxylase {ECO:0000313|EMBL:AIE84362.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbrii
Displaying 17 items

View Taxonomy