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13_1_40cm_scaffold_12725

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_12725_1
Thauera phenylacetica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..1310)
DNA (1308bp) protein (436aa)
Putative metal-dependent RNase n=1 Tax=Thauera phenylacetica B4P RepID=N6YLX8_9RHOO
Putative metal-dependent RNase {ECO:0000313|EMBL:ENO95326.1}; TaxID=1234382 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera phenylaceti
13_1_40cm_scaffold_12725_2
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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1526..1933
DNA (408bp) protein (136aa)
gcvP; glycine dehydrogenase (EC:1.4.4.2); K00281 glycine dehydrogenase [EC:1.4.4.2] Tax=GWC2_Gemmatimonadetes_71_10_curated
Glycine dehydrogenase (decarboxylating) n=1 Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0FWL9_ECHVK
Glycine dehydrogenase [decarboxylating]
13_1_40cm_scaffold_12725_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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2656..4323
DNA (1668bp) protein (556aa)
Putative peptide ABC transporter substrate binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6E3_GEMAT
putative peptide ABC transporter substrate binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
ABC-type transporter, periplasmic subunit
13_1_40cm_scaffold_12725_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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4324..5328
DNA (1005bp) protein (335aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Chlorobium phaeobacteroides (strain DSM 266) RepID=A1BDZ7_CHLPD
binding-protein-dependent transport system inner membrane protein; K02033 peptide/nickel transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
binding-protein-dependent transport system inner membrane protein
13_1_40cm_scaffold_12725_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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5325..6251
DNA (927bp) protein (309aa)
Uncharacterized protein n=2 Tax=Desulfovibrio RepID=D9YD73_9DELT
binding-protein-dependent transport systems inner membrane component; K02034 peptide/nickel transport system permease protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
binding-protein-dependent transporters inner membrane component
13_1_40cm_scaffold_12725_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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6248..7270
DNA (1023bp) protein (341aa)
oligopeptide/dipeptide ABC transporter, ATPase subunit
Oligopeptide/dipeptide ABC transporter, ATPase subunit {ECO:0000313|EMBL:AHG90217.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
oligopeptide/dipeptide ABC transporter ATPase id=24464123 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=Halanaerobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
13_1_40cm_scaffold_12725_7
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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7267..8277
DNA (1011bp) protein (337aa)
Peptide ABC transporter ATP-binding protein n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08YM4_STIAD
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:EAU65616.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigma
oligopeptide/dipeptide ABC transporter, ATPase subunit
13_1_40cm_scaffold_12725_8
GWA2_Deltaproteobacteria_54_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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8274..8882
DNA (609bp) protein (203aa)
hypothetical protein Tax=GWA2_Deltaproteobacteria_54_12_curated
hypothetical protein id=15193866 bin=GWC2_NOV_55_46 species=Geobacter bemidjiensis genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_NOV_55_46 organism_group=Proteobacteria
13_1_40cm_scaffold_12725_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(8935..9942)
DNA (1008bp) protein (336aa)
Di-/tripeptide transporter n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PMQ1_9DELT
proton/peptide symporter family protein; K03305 proton-dependent oligopeptide transporter, POT family Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
proton/peptide symporter family protein
Displaying 9 items

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